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  5. Pp3c1_29690V3.1

Pp3c1_29690V3.1


Description : methyl-CPG-binding domain 9


Gene families : OG_01_0000044 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_29690V3.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_17990V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_6200V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_8090V3.1 No alias ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_8100V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_5040V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_16020V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_16730V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_32680V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_37130V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_7530V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_3200V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_3600V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c27_3990V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_18690V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_25170V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_3390V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_21380V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_25680V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s466_20V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!