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  5. Pp3c1_8170V3.1

Pp3c1_8170V3.1


Description : plastid transcriptionally active 3


Gene families : OG_01_0004124 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_8170V3.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT3G04260 No alias plastid transcriptionally active 3 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g04680.1 No alias PAP1/TAC3 cofactor of plastid-encoded RNA polymerase 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!