AT2G13790


Description : somatic embryogenesis receptor-like kinase 4


Gene families : OG_01_0000139 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G13790
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT5G21090 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65240 No alias Leucine-rich repeat protein kinase family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g04150.1 No alias LRR receptor kinase SERK2 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g10170.1 No alias Probable LRR receptor-like serine/threonine-protein... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g09160.1 No alias brassinosteroid co-receptor protein kinase (BAK).... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06051.1 No alias BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Interproscan
BP GO:0002237 response to molecule of bacterial origin RCA Interproscan
MF GO:0004672 protein kinase activity ISS Interproscan
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006468 protein phosphorylation ISS Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0008219 cell death IGI Interproscan
BP GO:0009742 brassinosteroid mediated signaling pathway IGI Interproscan
BP GO:0010150 leaf senescence IGI Interproscan
BP GO:0010200 response to chitin IEP Interproscan
BP GO:0010200 response to chitin RCA Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0031348 negative regulation of defense response RCA Interproscan
MF GO:0033612 receptor serine/threonine kinase binding IPI Interproscan
BP GO:0043069 negative regulation of programmed cell death RCA Interproscan
BP GO:0060548 negative regulation of cell death IMP Interproscan
BP GO:1900140 regulation of seedling development IMP Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0001664 G protein-coupled receptor binding IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP HCCA
MF GO:0004713 protein tyrosine kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 ion channel activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 cellular biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006873 cellular ion homeostasis IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008300 isoprenoid catabolic process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009652 thigmotropism IEP HCCA
BP GO:0009682 induced systemic resistance IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009759 indole glucosinolate biosynthetic process IEP HCCA
BP GO:0009804 coumarin metabolic process IEP HCCA
BP GO:0009805 coumarin biosynthetic process IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010148 transpiration IEP HCCA
BP GO:0010185 regulation of cellular defense response IEP HCCA
MF GO:0010294 abscisic acid glucosyltransferase activity IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010324 membrane invagination IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015446 ATPase-coupled arsenite transmembrane transporter activity IEP HCCA
MF GO:0015645 fatty acid ligase activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015700 arsenite transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015802 basic amino acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016107 sesquiterpenoid catabolic process IEP HCCA
BP GO:0016115 terpenoid catabolic process IEP HCCA
BP GO:0016143 S-glycoside metabolic process IEP HCCA
BP GO:0016145 S-glycoside catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
MF GO:0019137 thioglucosidase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
CC GO:0019897 extrinsic component of plasma membrane IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030003 cellular cation homeostasis IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
CC GO:0031201 SNARE complex IEP HCCA
CC GO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0032268 regulation of cellular protein metabolic process IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034214 protein hexamerization IEP HCCA
BP GO:0034754 cellular hormone metabolic process IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0042343 indole glucosinolate metabolic process IEP HCCA
BP GO:0042344 indole glucosinolate catabolic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
CC GO:0043230 extracellular organelle IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0043290 apocarotenoid catabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
MF GO:0043495 protein-membrane adaptor activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0044106 cellular amine metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
MF GO:0045140 inositol phosphoceramide synthase activity IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0045431 flavonol synthase activity IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046218 indolalkylamine catabolic process IEP HCCA
BP GO:0046345 abscisic acid catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046870 cadmium ion binding IEP HCCA
BP GO:0046937 phytochelatin metabolic process IEP HCCA
BP GO:0046938 phytochelatin biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051245 negative regulation of cellular defense response IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052033 obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052482 defense response by cell wall thickening IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052544 defense response by callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0055080 cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0060860 regulation of floral organ abscission IEP HCCA
BP GO:0060862 negative regulation of floral organ abscission IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0065010 extracellular membrane-bounded organelle IEP HCCA
CC GO:0070062 extracellular exosome IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072658 maintenance of protein location in membrane IEP HCCA
BP GO:0072660 maintenance of protein location in plasma membrane IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:0120256 olefinic compound catabolic process IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
MF GO:1901683 arsenate ion transmembrane transporter activity IEP HCCA
CC GO:1903561 extracellular vesicle IEP HCCA
BP GO:1905421 regulation of plant organ morphogenesis IEP HCCA
BP GO:2000067 regulation of root morphogenesis IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 295 566
IPR013210 LRR_N_plant-typ 30 72
PLAZA 3.0 Dicots AT2G13790