1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c23_15260V3.1

Pp3c23_15260V3.1


Description : SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein


Gene families : OG_01_0001495 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001495_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_15260V3.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Cre06.g307450 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03457.1 No alias component SF3A1 of splicing factor 3A complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!