Pp3c23_17280V3.1

Description : No annotation

Gene families : OG_01_0000097 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c23_17280V3.1
Cluster	HCCA: Cluster_119

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g141606	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g145127	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre05.g244250	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g392282	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g403800	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre11.g476050	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g484250	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g624950	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g627576	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g685450	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g13570.1	No alias	heavy chain of Dynein microtubule-based motor protein complex	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005875	microtubule associated complex	None	Extended
BP	GO:0006928	movement of cell or subcellular component	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
CC	GO:0030286	dynein complex	IEA	Interproscan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004629	phospholipase C activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0019239	deaminase activity	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004273	Dynein_heavy_D6_P-loop	3668	3785
IPR041228	Dynein_C	4245	4316
IPR041228	Dynein_C	3960	4190
IPR013602	Dynein_heavy_linker	1025	1428
IPR041658	AAA_lid_11	3786	3954
IPR035706	AAA_9	3202	3422
IPR024317	Dynein_heavy_chain_D4_dom	2665	2814
IPR041589	DNAH3_AAA_lid_1	2440	2527
IPR024743	Dynein_HC_stalk	2828	3170
IPR041466	Dynein_AAA5_ext	2049	2204
IPR035699	AAA_6	1555	1881

External Links

No external refs found!

Pp3c23_17280V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation