AT2G17620

Description : Cyclin B2;1

Gene families : OG_01_0001223 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G17620
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
Mp2g00590.1	No alias	cyclin (CYCB)	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g10030.1	No alias	cyclin (CYCB)	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_21520V3.1	No alias	CYCLIN B2;4	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_18910V3.1	No alias	CYCLIN B2;4	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	RCA	Interproscan
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	RCA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0008283	cell population proliferation	RCA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010440	stomatal lineage progression	RCA	Interproscan
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	ISS	Interproscan
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
MF	GO:0019207	kinase regulator activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0051726	regulation of cell cycle	ISS	Interproscan
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
CC	GO:0000228	nuclear chromosome	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
CC	GO:0000776	kinetochore	IEP	HCCA
CC	GO:0000793	condensed chromosome	IEP	HCCA
CC	GO:0000794	condensed nuclear chromosome	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003713	transcription coactivator activity	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004709	MAP kinase kinase kinase activity	IEP	HCCA
MF	GO:0004871	obsolete signal transducer activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005834	heterotrimeric G-protein complex	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
BP	GO:0006261	DNA-dependent DNA replication	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
BP	GO:0007088	regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0007093	mitotic cell cycle checkpoint signaling	IEP	HCCA
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0007349	cellularization	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
BP	GO:0009558	embryo sac cellularization	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
CC	GO:0010369	chromocenter	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
BP	GO:0010948	negative regulation of cell cycle process	IEP	HCCA
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016458	obsolete gene silencing	IEP	HCCA
BP	GO:0016572	histone phosphorylation	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
BP	GO:0031047	gene silencing by RNA	IEP	HCCA
BP	GO:0031122	cytoplasmic microtubule organization	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031577	spindle checkpoint signaling	IEP	HCCA
BP	GO:0032875	regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0033045	regulation of sister chromatid segregation	IEP	HCCA
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	HCCA
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	HCCA
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	HCCA
CC	GO:0033597	mitotic checkpoint complex	IEP	HCCA
BP	GO:0042023	DNA endoreduplication	IEP	HCCA
BP	GO:0043622	cortical microtubule organization	IEP	HCCA
BP	GO:0044786	cell cycle DNA replication	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0045787	positive regulation of cell cycle	IEP	HCCA
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	HCCA
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0051783	regulation of nuclear division	IEP	HCCA
BP	GO:0051784	negative regulation of nuclear division	IEP	HCCA
BP	GO:0051983	regulation of chromosome segregation	IEP	HCCA
BP	GO:0051985	negative regulation of chromosome segregation	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0071173	spindle assembly checkpoint signaling	IEP	HCCA
BP	GO:0071174	mitotic spindle checkpoint signaling	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090329	regulation of DNA-dependent DNA replication	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA
CC	GO:1905360	GTPase complex	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
BP	GO:1905818	regulation of chromosome separation	IEP	HCCA
BP	GO:1905819	negative regulation of chromosome separation	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	HCCA
BP	GO:2001251	negative regulation of chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006671	Cyclin_N	174	300
IPR004367	Cyclin_C-dom	302	417

External Links

PLAZA 3.0 Dicots	AT2G17620

AT2G17620

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation