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  5. Pp3c24_16280V3.1

Pp3c24_16280V3.1


Description : No annotation


Gene families : OG_01_0000040 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_16280V3.1
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Pp3c12_12280V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_15570V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_14360V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_9200V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_10090V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_22130V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_4930V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_11130V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_18160V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_18050V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_16480V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_8560V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_5030V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_790V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_13210V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_13470V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_1500V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_15080V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_22531V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_3320V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_4070V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_17660V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_4700V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!