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  5. Pp3c24_18790V3.1

Pp3c24_18790V3.1


Description : Ribosomal protein L18ae/LX family protein


Gene families : OG_01_0000920 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_18790V3.1
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT2G34480 No alias Ribosomal protein L18ae/LX family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G14600 No alias Ribosomal protein L18ae/LX family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre01.g047750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g17730.1 No alias component RPL18a of LSU proteome component 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_7770V3.1 No alias Ribosomal protein L18ae/LX family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_12320V3.1 No alias Ribosomal protein L18ae/LX family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_15150V3.1 No alias Ribosomal protein L18ae/LX family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06670.1 No alias component eL20 of LSU proteome component 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!