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  5. Pp3c24_20960V3.1

Pp3c24_20960V3.1


Description : photosystem I subunit E-2


Gene families : OG_01_0003079 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c24_20960V3.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT2G20260 No alias photosystem I subunit E-2 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G28750 No alias Photosystem I reaction centre subunit IV / PsaE protein 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g420350 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.17 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g24020.1 No alias component PsaE of PS-I complex 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003375 PSI_PsaE 72 130
No external refs found!