Coexpression cluster: Cluster_171 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 12.09% (11/91) 6.89 0.0 0.0
GO:0015979 photosynthesis 12.09% (11/91) 6.69 0.0 0.0
GO:0098796 membrane protein complex 13.19% (12/91) 5.57 0.0 0.0
GO:0009522 photosystem I 7.69% (7/91) 7.59 0.0 0.0
GO:0032991 protein-containing complex 14.29% (13/91) 4.4 0.0 0.0
GO:0009538 photosystem I reaction center 4.4% (4/91) 7.31 0.0 0.0
GO:0005575 cellular_component 14.29% (13/91) 2.65 0.0 3e-06
GO:0009523 photosystem II 4.4% (4/91) 6.23 0.0 4e-06
GO:0044237 cellular metabolic process 13.19% (12/91) 2.23 1e-05 0.000145
GO:0009987 cellular process 14.29% (13/91) 1.96 2.7e-05 0.000281
GO:0009507 chloroplast 2.2% (2/91) 7.89 2.3e-05 0.000288
GO:0009536 plastid 2.2% (2/91) 7.89 2.3e-05 0.000288
GO:0016020 membrane 5.49% (5/91) 3.85 2.7e-05 0.000304
GO:0008152 metabolic process 13.19% (12/91) 2.01 4e-05 0.000391
GO:0008150 biological_process 14.29% (13/91) 1.67 0.000215 0.001951
GO:0009654 photosystem II oxygen evolving complex 2.2% (2/91) 5.89 0.000504 0.004282
GO:0110165 cellular anatomical entity 7.69% (7/91) 2.14 0.001082 0.008173
GO:1990204 oxidoreductase complex 2.2% (2/91) 5.39 0.001029 0.00823
GO:0042549 photosystem II stabilization 1.1% (1/91) 8.48 0.002804 0.015252
GO:0043467 regulation of generation of precursor metabolites and energy 1.1% (1/91) 8.48 0.002804 0.015252
GO:0042548 regulation of photosynthesis, light reaction 1.1% (1/91) 8.48 0.002804 0.015252
GO:0010207 photosystem II assembly 1.1% (1/91) 8.48 0.002804 0.015252
GO:0010109 regulation of photosynthesis 1.1% (1/91) 8.48 0.002804 0.015252
GO:0010242 oxygen evolving activity 1.1% (1/91) 8.48 0.002804 0.015252
GO:0009512 cytochrome b6f complex 1.1% (1/91) 8.48 0.002804 0.015252
GO:0009055 electron transfer activity 2.2% (2/91) 4.12 0.005937 0.031057
GO:0034357 photosynthetic membrane 1.1% (1/91) 6.89 0.008388 0.04074
GO:0042651 thylakoid membrane 1.1% (1/91) 6.89 0.008388 0.04074
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.1% (1/91) 6.48 0.011168 0.044672
GO:0005261 cation channel activity 1.1% (1/91) 6.48 0.011168 0.044672
GO:0015252 proton channel activity 1.1% (1/91) 6.48 0.011168 0.044672
GO:1902494 catalytic complex 2.2% (2/91) 3.75 0.009763 0.045785
GO:0043231 intracellular membrane-bounded organelle 2.2% (2/91) 3.72 0.01012 0.045878
GO:0043227 membrane-bounded organelle 2.2% (2/91) 3.67 0.010852 0.047608
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_98 0.068 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_106 0.214 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_151 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_205 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_239 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_27 0.175 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_7 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.192 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_14 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_23 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_39 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_74 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.039 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_103 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_149 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_24 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_44 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_54 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_63 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.102 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_177 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_193 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_231 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_256 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.114 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_79 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.042 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_123 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_170 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_329 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (91) (download table)

InterPro Domains

GO Terms

Family Terms