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  5. Pp3c26_11220V3.1

Pp3c26_11220V3.1


Description : Zinc-binding ribosomal protein family protein


Gene families : OG_01_0001567 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001567_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_11220V3.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT3G23390 No alias Zinc-binding ribosomal protein family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G14320 No alias Zinc-binding ribosomal protein family protein 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g310700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g25770.1 No alias component RPL36a of LSU proteome component 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04829.1 No alias component eL42 of LSU proteome component 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 19 93
No external refs found!