1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c26_12080V3.1

Pp3c26_12080V3.1


Description : Sas10/Utp3/C1D family


Gene families : OG_01_0001316 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001316_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_12080V3.1
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AT1G07840 No alias Sas10/Utp3/C1D family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G43650 No alias Sas10/U3 ribonucleoprotein (Utp) family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g394399 No alias No description available 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18120.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007146 Sas10/Utp3/C1D 12 92
No external refs found!