Pp3c2_17830V3.1

Description : No annotation

Gene families : OG_01_0000472 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c2_17830V3.1
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
Pp3c11_17091V3.1	No alias	No annotation	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_18840V3.1	No alias	No annotation	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_7990V3.1	No alias	No annotation	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_28V3.1	No alias	No annotation	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_36V3.1	No alias	No annotation	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_15030V3.1	No alias	No annotation	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_30020V3.1	No alias	No annotation	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_15180V3.1	No alias	No annotation	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_29219V3.1	No alias	No annotation	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_29360V3.1	No alias	No annotation	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_29680V3.1	No alias	No annotation	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_24920V3.1	No alias	RNA polymerase II large subunit	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_1840V3.1	No alias	No annotation	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006935	Helicase/UvrB_N	54	185

External Links

No external refs found!