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  5. Pp3c2_27590V3.1

Pp3c2_27590V3.1


Description : CLP protease R subunit 4


Gene families : OG_01_0003555 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_27590V3.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT4G17040 No alias CLP protease R subunit 4 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g204350 No alias Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g03170.1 No alias non-proteolytic core component ClpR of chloroplast... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!