AT2G22830

Description : squalene epoxidase 2

Gene families : OG_01_0003431 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003431_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G22830
Cluster	HCCA: Cluster_214

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006722	triterpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016104	triterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0016126	sterol biosynthetic process	TAS	Interproscan
BP	GO:0019742	pentacyclic triterpenoid metabolic process	None	Extended
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	RCA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006089	lactate metabolic process	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0006808	regulation of nitrogen utilization	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
BP	GO:0009438	methylglyoxal metabolic process	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010158	abaxial cell fate specification	IEP	HCCA
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0017118	lipoyltransferase activity	IEP	HCCA
MF	GO:0019187	beta-1,4-mannosyltransferase activity	IEP	HCCA
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	HCCA
BP	GO:0042180	cellular ketone metabolic process	IEP	HCCA
BP	GO:0042182	ketone catabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0046185	aldehyde catabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0051596	methylglyoxal catabolic process	IEP	HCCA
MF	GO:0051753	mannan synthase activity	IEP	HCCA
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013698	Squalene_epoxidase	273	543

External Links

PLAZA 3.0 Dicots	AT2G22830

AT2G22830

Expression Profile

Co-expression Networks

Functional Annotation