Coexpression cluster: Cluster_214 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009536 plastid 36.56% (34/93) 1.41 0.0 1.6e-05
GO:0009507 chloroplast 36.56% (34/93) 1.43 0.0 2e-05
GO:0009657 plastid organization 9.68% (9/93) 3.14 1e-06 0.000293
GO:0009658 chloroplast organization 8.6% (8/93) 3.35 1e-06 0.000324
GO:0045962 positive regulation of development, heterochronic 3.23% (3/93) 6.8 2e-06 0.000412
GO:0006848 pyruvate transport 2.15% (2/93) 8.22 1.1e-05 0.001617
GO:0050833 pyruvate transmembrane transporter activity 2.15% (2/93) 8.22 1.1e-05 0.001617
GO:0000023 maltose metabolic process 6.45% (6/93) 3.55 1.3e-05 0.001624
GO:0005984 disaccharide metabolic process 6.45% (6/93) 3.21 4.9e-05 0.003113
GO:0044093 positive regulation of molecular function 5.38% (5/93) 3.67 4.8e-05 0.003241
GO:0006082 organic acid metabolic process 19.35% (18/93) 1.49 5.4e-05 0.003242
GO:0009250 glucan biosynthetic process 7.53% (7/93) 2.88 4.8e-05 0.003449
GO:0044281 small molecule metabolic process 23.66% (22/93) 1.32 4.6e-05 0.00355
GO:0009987 cellular process 56.99% (53/93) 0.64 4.5e-05 0.003755
GO:0043085 positive regulation of catalytic activity 5.38% (5/93) 3.69 4.4e-05 0.004069
GO:0019252 starch biosynthetic process 6.45% (6/93) 3.25 4.1e-05 0.004178
GO:0006996 organelle organization 15.05% (14/93) 1.7 9.3e-05 0.004298
GO:0043436 oxoacid metabolic process 19.35% (18/93) 1.53 3.9e-05 0.004356
GO:0042168 heme metabolic process 3.23% (3/93) 5.1 9e-05 0.004361
GO:0009941 chloroplast envelope 9.68% (9/93) 2.32 8.2e-05 0.004367
GO:0009311 oligosaccharide metabolic process 6.45% (6/93) 3.09 7.9e-05 0.004416
GO:0009526 plastid envelope 9.68% (9/93) 2.31 8.8e-05 0.004451
GO:0005982 starch metabolic process 6.45% (6/93) 2.98 0.000117 0.00517
GO:0006790 sulfur compound metabolic process 10.75% (10/93) 2.08 0.000131 0.005524
GO:0044249 cellular biosynthetic process 26.88% (25/93) 1.09 0.000172 0.006682
GO:0050793 regulation of developmental process 11.83% (11/93) 1.91 0.000166 0.006739
GO:0031967 organelle envelope 9.68% (9/93) 2.15 0.000196 0.007085
GO:0031975 envelope 9.68% (9/93) 2.15 0.000196 0.007085
GO:0019752 carboxylic acid metabolic process 17.2% (16/93) 1.44 0.000228 0.007965
GO:0006073 cellular glucan metabolic process 7.53% (7/93) 2.48 0.000269 0.008781
GO:0044042 glucan metabolic process 7.53% (7/93) 2.48 0.000269 0.008781
GO:1901576 organic substance biosynthetic process 27.96% (26/93) 0.99 0.000366 0.01029
GO:0040034 regulation of development, heterochronic 3.23% (3/93) 4.44 0.000358 0.010344
GO:0044237 cellular metabolic process 41.94% (39/93) 0.73 0.00033 0.010439
GO:0016226 iron-sulfur cluster assembly 4.3% (4/93) 3.59 0.000353 0.010519
GO:0031163 metallo-sulfur cluster assembly 4.3% (4/93) 3.59 0.000353 0.010519
GO:0009965 leaf morphogenesis 5.38% (5/93) 2.98 0.000441 0.012061
GO:0006399 tRNA metabolic process 4.3% (4/93) 3.47 0.000475 0.012641
GO:0009668 plastid membrane organization 5.38% (5/93) 2.92 0.000545 0.0138
GO:0010027 thylakoid membrane organization 5.38% (5/93) 2.92 0.000545 0.0138
GO:1905392 plant organ morphogenesis 6.45% (6/93) 2.54 0.000605 0.013911
GO:0050790 regulation of catalytic activity 5.38% (5/93) 2.9 0.000571 0.014093
GO:0000271 polysaccharide biosynthetic process 8.6% (8/93) 2.08 0.000628 0.014123
GO:0072523 purine-containing compound catabolic process 2.15% (2/93) 5.76 0.000603 0.014198
GO:0009058 biosynthetic process 27.96% (26/93) 0.94 0.00059 0.01421
GO:0061024 membrane organization 5.38% (5/93) 2.82 0.000728 0.016013
GO:0015718 monocarboxylic acid transport 2.15% (2/93) 5.52 0.000852 0.018342
GO:0016043 cellular component organization 19.35% (18/93) 1.16 0.000949 0.020011
GO:0008152 metabolic process 44.09% (41/93) 0.63 0.000998 0.020202
GO:0006807 nitrogen compound metabolic process 32.26% (30/93) 0.81 0.000982 0.020287
GO:0004673 protein histidine kinase activity 2.15% (2/93) 5.31 0.001142 0.021007
GO:0016775 phosphotransferase activity, nitrogenous group as acceptor 2.15% (2/93) 5.31 0.001142 0.021007
GO:0008028 monocarboxylic acid transmembrane transporter activity 2.15% (2/93) 5.31 0.001142 0.021007
GO:0033692 cellular polysaccharide biosynthetic process 7.53% (7/93) 2.13 0.001122 0.021839
GO:0042180 cellular ketone metabolic process 4.3% (4/93) 3.15 0.001102 0.021875
GO:0033014 tetrapyrrole biosynthetic process 4.3% (4/93) 3.1 0.001262 0.022811
GO:0080092 regulation of pollen tube growth 2.15% (2/93) 5.13 0.001472 0.025689
GO:0065009 regulation of molecular function 5.38% (5/93) 2.6 0.001471 0.026119
GO:0003824 catalytic activity 37.63% (35/93) 0.68 0.001524 0.026141
GO:0006520 cellular amino acid metabolic process 8.6% (8/93) 1.85 0.001716 0.026722
GO:0010029 regulation of seed germination 3.23% (3/93) 3.67 0.001712 0.027074
GO:0048481 plant ovule development 4.3% (4/93) 2.98 0.001711 0.027484
GO:0034637 cellular carbohydrate biosynthetic process 7.53% (7/93) 2.03 0.001684 0.027495
GO:0071704 organic substance metabolic process 40.86% (38/93) 0.63 0.001632 0.02752
GO:0010769 regulation of cell morphogenesis involved in differentiation 2.15% (2/93) 4.97 0.001843 0.027839
GO:0010020 chloroplast fission 2.15% (2/93) 4.97 0.001843 0.027839
GO:0005976 polysaccharide metabolic process 8.6% (8/93) 1.86 0.001684 0.027939
GO:1900140 regulation of seedling development 3.23% (3/93) 3.61 0.001931 0.028326
GO:0016051 carbohydrate biosynthetic process 9.68% (9/93) 1.69 0.001907 0.028377
GO:0009790 embryo development 7.53% (7/93) 1.98 0.002048 0.028792
GO:0009793 embryo development ending in seed dormancy 7.53% (7/93) 1.98 0.002048 0.028792
GO:0043572 plastid fission 2.15% (2/93) 4.89 0.002043 0.029542
GO:0042352 GDP-L-fucose salvage 1.08% (1/93) 8.22 0.003363 0.033695
GO:0047341 fucose-1-phosphate guanylyltransferase activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0050201 fucokinase activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0052667 phosphomethylethanolamine N-methyltransferase activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0051266 sirohydrochlorin ferrochelatase activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0050518 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0010202 response to low fluence red light stimulus 1.08% (1/93) 8.22 0.003363 0.033695
GO:0031517 red light photoreceptor activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0006849 plasma membrane pyruvate transport 1.08% (1/93) 8.22 0.003363 0.033695
GO:1901475 pyruvate transmembrane transport 1.08% (1/93) 8.22 0.003363 0.033695
GO:0010368 chloroplast isoamylase complex 1.08% (1/93) 8.22 0.003363 0.033695
GO:0043033 isoamylase complex 1.08% (1/93) 8.22 0.003363 0.033695
GO:0009509 chromoplast 1.08% (1/93) 8.22 0.003363 0.033695
GO:0009537 proplastid 1.08% (1/93) 8.22 0.003363 0.033695
GO:0003991 acetylglutamate kinase activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0034618 arginine binding 1.08% (1/93) 8.22 0.003363 0.033695
GO:0042450 arginine biosynthetic process via ornithine 1.08% (1/93) 8.22 0.003363 0.033695
GO:0071522 ureidoglycine aminohydrolase activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity 1.08% (1/93) 8.22 0.003363 0.033695
GO:0015805 S-adenosyl-L-methionine transport 1.08% (1/93) 8.22 0.003363 0.033695
GO:0071840 cellular component organization or biogenesis 19.35% (18/93) 1.03 0.00251 0.033872
GO:0048638 regulation of developmental growth 5.38% (5/93) 2.42 0.002467 0.034194
GO:0140101 catalytic activity, acting on a tRNA 3.23% (3/93) 3.48 0.002508 0.034304
GO:1901566 organonitrogen compound biosynthetic process 12.9% (12/93) 1.34 0.00272 0.034838
GO:0006783 heme biosynthetic process 2.15% (2/93) 4.69 0.002703 0.035072
GO:0010075 regulation of meristem growth 4.3% (4/93) 2.8 0.002687 0.035314
GO:0008652 cellular amino acid biosynthetic process 6.45% (6/93) 2.12 0.002671 0.035565
GO:0042440 pigment metabolic process 5.38% (5/93) 2.29 0.00362 0.035917
GO:0040008 regulation of growth 5.38% (5/93) 2.29 0.003723 0.036575
GO:0043621 protein self-association 2.15% (2/93) 4.63 0.002943 0.037223
GO:0044264 cellular polysaccharide metabolic process 7.53% (7/93) 1.88 0.003015 0.037675
GO:0006089 lactate metabolic process 3.23% (3/93) 3.23 0.004076 0.037839
GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione 3.23% (3/93) 3.23 0.004076 0.037839
GO:0061727 methylglyoxal catabolic process to lactate 3.23% (3/93) 3.23 0.004076 0.037839
GO:0009438 methylglyoxal metabolic process 3.23% (3/93) 3.22 0.004197 0.037921
GO:0042182 ketone catabolic process 3.23% (3/93) 3.22 0.004197 0.037921
GO:0051596 methylglyoxal catabolic process 3.23% (3/93) 3.22 0.004197 0.037921
GO:0060089 molecular transducer activity 3.23% (3/93) 3.25 0.003956 0.038498
GO:0019200 carbohydrate kinase activity 2.15% (2/93) 4.41 0.003995 0.038504
GO:0046185 aldehyde catabolic process 3.23% (3/93) 3.2 0.00432 0.038692
GO:0044238 primary metabolic process 35.48% (33/93) 0.63 0.004072 0.038879
GO:0006778 porphyrin-containing compound metabolic process 4.3% (4/93) 2.57 0.004695 0.04168
GO:0033013 tetrapyrrole metabolic process 4.3% (4/93) 2.56 0.004863 0.042791
GO:0006081 cellular aldehyde metabolic process 5.38% (5/93) 2.19 0.004926 0.042979
GO:0044272 sulfur compound biosynthetic process 6.45% (6/93) 1.91 0.005449 0.046731
GO:1901360 organic cyclic compound metabolic process 21.51% (20/93) 0.86 0.005506 0.046823
GO:1901564 organonitrogen compound metabolic process 24.73% (23/93) 0.79 0.005443 0.047082
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_19 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_27 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_28 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_49 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_52 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_55 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_86 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_87 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_91 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_96 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_110 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_115 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_127 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_155 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_158 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_160 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_173 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_190 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_196 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_211 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_215 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_216 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_223 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_230 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_231 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_232 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_233 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_71 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_137 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_156 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_7 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_14 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_51 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_72 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_73 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_77 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_80 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_96 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_128 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_148 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_149 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_164 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_165 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_4 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_7 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_59 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_68 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_99 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_121 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_124 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_145 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_152 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_163 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_195 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_205 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_222 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_223 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_234 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_240 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_242 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_248 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_255 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_267 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_292 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_299 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_302 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_27 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_32 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_78 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_83 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_127 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_128 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_131 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_155 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_186 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (93) (download table)

InterPro Domains

GO Terms

Family Terms