1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c3_23700V3.1

Pp3c3_23700V3.1


Description : Ribosomal protein S19 family protein


Gene families : OG_01_0000618 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_23700V3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AT1G04270 No alias cytosolic ribosomal protein S15 0.35 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G09510 No alias Ribosomal protein S19 family protein 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre08.g360900 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.29 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g15000.1 No alias component RPS15 of SSU proteome 0.24 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_19770V3.1 No alias Ribosomal protein S19 family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11194.2 No alias component uS19 of SSU proteome 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 48 133
No external refs found!