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  5. Pp3c3_30890V3.1

Pp3c3_30890V3.1


Description : No annotation


Gene families : OG_01_0000003 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_30890V3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_16940V3.1 No alias transmembrane receptors;ATP binding 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_3230V3.1 No alias VH1-interacting kinase 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_4180V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_25610V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_3030V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_3810V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_3820V3.1 No alias Protein kinase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_19890V3.1 No alias Protein kinase superfamily protein with... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_19900V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_2500V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_2910V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_2920V3.1 No alias Protein kinase family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_12470V3.1 No alias MAPK/ERK kinase kinase 3 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_13230V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_13240V3.1 No alias Protein kinase family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_13600V3.1 No alias Protein kinase superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_6750V3.1 No alias PAS domain-containing protein tyrosine kinase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_960V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_970V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_19550V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_21720V3.1 No alias Protein kinase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_21730V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_21740V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_14980V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_18950V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_21563V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_21566V3.1 No alias Protein kinase superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_21570V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_22160V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_8727V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_8740V3.1 No alias Protein kinase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_8750V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_18616V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_22270V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_2410V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_4910V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_17930V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_22019V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_22230V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_2990V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_3010V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_18280V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_18290V3.1 No alias Protein kinase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_3920V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_6250V3.1 No alias Protein kinase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_3640V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_5920V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_12950V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_13120V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_13130V3.1 No alias Protein kinase superfamily protein with... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_17190V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_11530V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_21800V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_30870V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_30880V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_2300V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_12460V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_5920V3.1 No alias Protein kinase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_5930V3.1 No alias Protein kinase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_6000V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_17410V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_21000V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_21890V3.1 No alias Protein kinase family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_14410V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_2150V3.1 No alias Protein kinase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_10230V3.1 No alias transmembrane receptors;ATP binding 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_16390V3.1 No alias Protein kinase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_16400V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_1940V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_25040V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_9314V3.1 No alias Protein kinase superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s1178_10V3.1 No alias No annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s794_20V3.1 No alias transmembrane receptors;ATP binding 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s876_30V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!