Coexpression cluster: Cluster_75 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034062 5'-3' RNA polymerase activity 4.12% (8/194) 4.34 0.0 0.0
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 4.12% (8/194) 4.34 0.0 0.0
GO:0097747 RNA polymerase activity 4.12% (8/194) 4.34 0.0 0.0
GO:0006351 transcription, DNA-templated 4.12% (8/194) 4.14 0.0 0.0
GO:0097659 nucleic acid-templated transcription 4.12% (8/194) 4.14 0.0 0.0
GO:0016779 nucleotidyltransferase activity 4.12% (8/194) 4.08 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 5.15% (10/194) 3.77 0.0 0.0
GO:0032774 RNA biosynthetic process 4.12% (8/194) 4.01 0.0 1e-06
GO:0140098 catalytic activity, acting on RNA 4.12% (8/194) 3.74 0.0 2e-06
GO:0034654 nucleobase-containing compound biosynthetic process 4.12% (8/194) 3.74 0.0 2e-06
GO:0090304 nucleic acid metabolic process 5.15% (10/194) 3.22 0.0 2e-06
GO:0019438 aromatic compound biosynthetic process 4.12% (8/194) 3.62 0.0 3e-06
GO:0018130 heterocycle biosynthetic process 4.12% (8/194) 3.59 0.0 3e-06
GO:1901362 organic cyclic compound biosynthetic process 4.12% (8/194) 3.54 0.0 4e-06
GO:0006139 nucleobase-containing compound metabolic process 5.15% (10/194) 2.91 1e-06 8e-06
GO:0016772 transferase activity, transferring phosphorus-containing groups 5.67% (11/194) 2.69 1e-06 9e-06
GO:0006725 cellular aromatic compound metabolic process 5.15% (10/194) 2.84 2e-06 1e-05
GO:0046483 heterocycle metabolic process 5.15% (10/194) 2.84 2e-06 1.1e-05
GO:1901360 organic cyclic compound metabolic process 5.15% (10/194) 2.82 2e-06 1.1e-05
GO:0016070 RNA metabolic process 4.12% (8/194) 3.26 2e-06 1.2e-05
GO:0003677 DNA binding 4.12% (8/194) 2.8 2.2e-05 0.000119
GO:0016740 transferase activity 5.67% (11/194) 2.16 4.2e-05 0.000218
GO:0044260 cellular macromolecule metabolic process 6.7% (13/194) 1.78 0.000127 0.000634
GO:0043170 macromolecule metabolic process 6.7% (13/194) 1.56 0.000541 0.002393
GO:0003824 catalytic activity 8.76% (17/194) 1.31 0.000563 0.002397
GO:0032200 telomere organization 1.03% (2/194) 5.8 0.000525 0.002414
GO:0000723 telomere maintenance 1.03% (2/194) 5.8 0.000525 0.002414
GO:0034641 cellular nitrogen compound metabolic process 5.15% (10/194) 1.79 0.000701 0.002878
GO:0051276 chromosome organization 1.03% (2/194) 5.39 0.000972 0.003725
GO:0034645 cellular macromolecule biosynthetic process 4.12% (8/194) 2.0 0.00097 0.003846
GO:0009059 macromolecule biosynthetic process 4.12% (8/194) 1.97 0.001107 0.004105
GO:0044238 primary metabolic process 7.22% (14/194) 1.36 0.001244 0.004469
GO:0006807 nitrogen compound metabolic process 6.7% (13/194) 1.41 0.001361 0.004744
GO:0044271 cellular nitrogen compound biosynthetic process 4.12% (8/194) 1.91 0.001452 0.004911
GO:0003678 DNA helicase activity 1.03% (2/194) 4.93 0.001887 0.005864
GO:0008094 ATP-dependent activity, acting on DNA 1.03% (2/194) 4.93 0.001887 0.005864
GO:0071704 organic substance metabolic process 7.22% (14/194) 1.3 0.001834 0.006026
GO:0140097 catalytic activity, acting on DNA 1.03% (2/194) 4.69 0.002655 0.008034
GO:0003676 nucleic acid binding 4.12% (8/194) 1.73 0.003114 0.008953
GO:0006996 organelle organization 1.03% (2/194) 4.58 0.003085 0.009096
GO:0044237 cellular metabolic process 6.7% (13/194) 1.25 0.00358 0.009802
GO:0006281 DNA repair 1.03% (2/194) 4.48 0.003545 0.009945
GO:0044249 cellular biosynthetic process 4.12% (8/194) 1.66 0.004103 0.010257
GO:0051716 cellular response to stimulus 1.03% (2/194) 4.39 0.004036 0.010314
GO:0006974 cellular response to DNA damage stimulus 1.03% (2/194) 4.39 0.004036 0.010314
GO:0033554 cellular response to stress 1.03% (2/194) 4.39 0.004036 0.010314
GO:1901576 organic substance biosynthetic process 4.12% (8/194) 1.64 0.004522 0.011065
GO:0008152 metabolic process 7.22% (14/194) 1.15 0.00478 0.011451
GO:0009058 biosynthetic process 4.12% (8/194) 1.59 0.00546 0.012312
GO:0009987 cellular process 7.73% (15/194) 1.08 0.005367 0.012343
GO:0140657 ATP-dependent activity 1.55% (3/194) 3.09 0.005345 0.012545
GO:0004386 helicase activity 1.03% (2/194) 3.93 0.007589 0.016783
GO:0008150 biological_process 8.25% (16/194) 0.87 0.014761 0.032028
GO:0097159 organic cyclic compound binding 5.67% (11/194) 1.07 0.016996 0.035537
GO:1901363 heterocyclic compound binding 5.67% (11/194) 1.07 0.016996 0.035537
GO:0016272 prefoldin complex 0.52% (1/194) 5.8 0.017825 0.036604
GO:0006259 DNA metabolic process 1.03% (2/194) 3.1 0.022782 0.045964
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_69 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_35 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_2 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_3 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_9 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_10 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_11 0.054 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_13 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_20 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_21 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_28 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_30 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_34 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_37 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_38 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_39 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_40 0.045 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_42 0.079 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_43 0.061 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_44 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_45 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_56 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_57 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_60 0.065 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_61 0.076 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_63 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_65 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_66 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_70 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_72 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_73 0.045 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_74 0.086 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_78 0.079 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_79 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_80 0.056 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_81 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_88 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_89 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_90 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_91 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_96 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_98 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_100 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_105 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_107 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_127 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_128 0.066 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_129 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_137 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_158 0.047 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_159 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_161 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_165 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_172 0.052 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_179 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_186 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_190 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_198 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_225 0.053 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_227 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_236 0.068 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_238 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_241 0.068 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_252 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_266 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_309 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_321 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (194) (download table)

InterPro Domains

GO Terms

Family Terms