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  5. Pp3c4_24930V3.1

Pp3c4_24930V3.1


Description : uracil dna glycosylase


Gene families : OG_01_0000079 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_24930V3.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_15750V3.1 No alias uracil dna glycosylase 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_231V3.1 No alias nuclear RNA polymerase D1A 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_4010V3.1 No alias RNA polymerase II large subunit 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_15140V3.1 No alias RNA polymerase II large subunit 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_280V3.1 No alias uracil dna glycosylase 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_9940V3.1 No alias RNA polymerase II large subunit 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_10300V3.1 No alias RNA polymerase II large subunit 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_1950V3.1 No alias uracil dna glycosylase 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_24940V3.1 No alias RNA polymerase II large subunit 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_1410V3.1 No alias RNA polymerase II large subunit 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s67_110V3.1 No alias RNA polymerase II large subunit 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!