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  5. Pp3c4_27540V3.1

Pp3c4_27540V3.1


Description : Ribosomal protein S8 family protein


Gene families : OG_01_0000533 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_27540V3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AT1G07770 No alias ribosomal protein S15A 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G19720 No alias ribosomal protein S15A B 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G39590 No alias Ribosomal protein S8 family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46040 No alias ribosomal protein S15A D 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G29430 No alias ribosomal protein S15A E 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59850 No alias Ribosomal protein S8 family protein 0.39 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre05.g234637 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.48 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g06510.1 No alias component RPS15a of SSU proteome 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g13010.1 No alias component RPS15a of SSU proteome 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_10490V3.1 No alias Ribosomal protein S8 family protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_5750V3.1 No alias ribosomal protein S15A 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01584.1 No alias no hits & (original description: none) 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 7 130
No external refs found!