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  5. Pp3c4_29150V3.1

Pp3c4_29150V3.1


Description : photosystem I light harvesting complex gene 1


Gene families : OG_01_0002109 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_29150V3.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT3G54890 No alias photosystem I light harvesting complex gene 1 0.26 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g283050 No alias Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g15420.1 No alias component LHCa1 of LHC-I complex 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15241.1 No alias component LHCa1 of LHC-I complex 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!