Coexpression cluster: Cluster_103 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 7.44% (9/121) 6.19 0.0 0.0
GO:0015979 photosynthesis 7.44% (9/121) 5.99 0.0 0.0
GO:0098796 membrane protein complex 7.44% (9/121) 4.75 0.0 0.0
GO:0009523 photosystem II 4.13% (5/121) 6.14 0.0 0.0
GO:0009538 photosystem I reaction center 3.31% (4/121) 6.9 0.0 1e-06
GO:0009522 photosystem I 3.31% (4/121) 6.37 0.0 3e-06
GO:0032991 protein-containing complex 7.44% (9/121) 3.46 0.0 3e-06
GO:0009654 photosystem II oxygen evolving complex 2.48% (3/121) 6.07 1.1e-05 0.000164
GO:1990204 oxidoreductase complex 2.48% (3/121) 5.56 3.3e-05 0.000445
GO:0044237 cellular metabolic process 10.74% (13/121) 1.93 3.9e-05 0.000469
GO:0033014 tetrapyrrole biosynthetic process 1.65% (2/121) 7.07 8.2e-05 0.00083
GO:0033013 tetrapyrrole metabolic process 1.65% (2/121) 7.07 8.2e-05 0.00083
GO:0009987 cellular process 11.57% (14/121) 1.66 0.000142 0.001322
GO:0008152 metabolic process 10.74% (13/121) 1.72 0.000167 0.001446
GO:0019898 extrinsic component of membrane 1.65% (2/121) 6.26 0.000286 0.002306
GO:0008150 biological_process 12.4% (15/121) 1.46 0.00036 0.00272
GO:0005575 cellular_component 8.26% (10/121) 1.86 0.000452 0.003214
GO:1902494 catalytic complex 2.48% (3/121) 3.92 0.001033 0.006946
GO:0005509 calcium ion binding 1.65% (2/121) 4.54 0.003313 0.021098
GO:0004655 porphobilinogen synthase activity 0.83% (1/121) 8.07 0.003728 0.022554
GO:0006821 chloride transport 0.83% (1/121) 7.07 0.007442 0.026485
GO:0005254 chloride channel activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0005247 voltage-gated chloride channel activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0005253 anion channel activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0005244 voltage-gated ion channel activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 0.83% (1/121) 7.07 0.007442 0.026485
GO:0070567 cytidylyltransferase activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0004109 coproporphyrinogen oxidase activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0008483 transaminase activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0016769 transferase activity, transferring nitrogenous groups 0.83% (1/121) 7.07 0.007442 0.026485
GO:0008308 voltage-gated anion channel activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0022832 voltage-gated channel activity 0.83% (1/121) 7.07 0.007442 0.026485
GO:0043169 cation binding 3.31% (4/121) 2.47 0.006104 0.033572
GO:0046872 metal ion binding 3.31% (4/121) 2.47 0.005995 0.034543
GO:0016020 membrane 2.48% (3/121) 2.7 0.011299 0.035056
GO:0022836 gated channel activity 0.83% (1/121) 6.48 0.011142 0.03548
GO:0006779 porphyrin-containing compound biosynthetic process 0.83% (1/121) 6.48 0.011142 0.03548
GO:0015103 inorganic anion transmembrane transporter activity 0.83% (1/121) 6.48 0.011142 0.03548
GO:0006778 porphyrin-containing compound metabolic process 0.83% (1/121) 6.48 0.011142 0.03548
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 0.83% (1/121) 6.07 0.014829 0.039874
GO:0004751 ribose-5-phosphate isomerase activity 0.83% (1/121) 6.07 0.014829 0.039874
GO:0009052 pentose-phosphate shunt, non-oxidative branch 0.83% (1/121) 6.07 0.014829 0.039874
GO:0008509 anion transmembrane transporter activity 0.83% (1/121) 6.07 0.014829 0.039874
GO:0006820 anion transport 0.83% (1/121) 6.07 0.014829 0.039874
GO:0015698 inorganic anion transport 0.83% (1/121) 6.07 0.014829 0.039874
GO:0016836 hydro-lyase activity 0.83% (1/121) 5.75 0.018502 0.048669
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_86 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.057 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_106 0.176 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_135 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_149 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_151 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.057 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_239 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.042 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_27 0.118 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.118 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_156 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_7 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.211 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_42 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_103 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_127 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_138 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_149 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_163 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_71 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_171 0.102 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_231 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_283 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_295 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_4 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.149 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_109 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_127 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_137 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_144 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_171 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (121) (download table)

InterPro Domains

GO Terms

Family Terms