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  5. Pp3c5_17290V3.1

Pp3c5_17290V3.1


Description : photosystem II subunit X


Gene families : OG_01_0003910 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_17290V3.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT2G06520 No alias photosystem II subunit X 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g21460.1 No alias component PsbX of PS-II complex 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07970.1 No alias component PsbX of PS-II complex 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 85 122
No external refs found!