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  5. Pp3c6_19740V3.1

Pp3c6_19740V3.1


Description : Nucleoporin interacting component (Nup93/Nic96-like) family protein


Gene families : OG_01_0006852 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_19740V3.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Cre17.g717800 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g23730.1 No alias NUP93 scaffold nucleoporin of nuclear pore complex 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!