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  5. AT1G09640

AT1G09640


Description : Translation elongation factor EF1B, gamma chain


Gene families : OG_01_0002393 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G09640
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Mp7g04100.1 No alias component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_17550V3.1 No alias Translation elongation factor EF1B, gamma chain 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_14550V3.1 No alias Translation elongation factor EF1B, gamma chain 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_14784.1 No alias component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004815 aspartate-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0004825 methionine-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006422 aspartyl-tRNA aminoacylation IEP HCCA
BP GO:0006424 glutamyl-tRNA aminoacylation IEP HCCA
BP GO:0006431 methionyl-tRNA aminoacylation IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006611 protein export from nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010019 chloroplast-nucleus signaling pathway IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0010962 regulation of glucan biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017151 DEAD/H-box RNA helicase binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031300 intrinsic component of organelle membrane IEP HCCA
CC GO:0031301 integral component of organelle membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP HCCA
BP GO:0032950 regulation of beta-glucan metabolic process IEP HCCA
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070726 cell wall assembly IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0071668 plant-type cell wall assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0090056 regulation of chlorophyll metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901402 negative regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901464 negative regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902325 negative regulation of chlorophyll biosynthetic process IEP HCCA
BP GO:2001006 regulation of cellulose biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001662 EF1B_G_C 253 360
IPR004046 GST_C 132 197
IPR004045 Glutathione_S-Trfase_N 5 76
PLAZA 3.0 Dicots AT1G09640