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  5. Pp3c6_5960V3.1

Pp3c6_5960V3.1


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0000213 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_5960V3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Pp3c18_4900V3.1 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_15890V3.1 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_15990V3.1 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_20740V3.1 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_20820V3.1 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_35860V3.1 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_35880V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_11910V3.1 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_11940V3.1 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_5500V3.1 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_5549V3.1 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_5570V3.1 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_5640V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_5660V3.1 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_8180V3.1 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_10240V3.1 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_16320V3.1 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!