AT2G28350

Description : auxin response factor 10

Gene families : OG_01_0001966 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001966_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28350
Cluster	HCCA: Cluster_117

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007389	pattern specification process	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009734	auxin-activated signaling pathway	IMP	Interproscan
BP	GO:0009738	abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009743	response to carbohydrate	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010154	fruit development	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031537	regulation of anthocyanin metabolic process	None	Extended
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IMP	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0035198	miRNA binding	ISS	Interproscan
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048366	leaf development	IMP	Interproscan
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048441	petal development	IMP	Interproscan
BP	GO:0048442	sepal development	IMP	Interproscan
BP	GO:0048589	developmental growth	IMP	Interproscan
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048829	root cap development	IMP	Interproscan
BP	GO:0048829	root cap development	IGI	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051301	cell division	IGI	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
MF	GO:0061980	regulatory RNA binding	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009411	response to UV	IEP	HCCA
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009812	flavonoid metabolic process	IEP	HCCA
BP	GO:0009813	flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010054	trichoblast differentiation	IEP	HCCA
BP	GO:0010224	response to UV-B	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	115	216
IPR010525	ARF_dom	278	360

External Links

PLAZA 3.0 Dicots	AT2G28350

AT2G28350

Expression Profile

Co-expression Networks

Functional Annotation