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  5. Pp3c7_14200V3.1

Pp3c7_14200V3.1


Description : Ribosomal protein S12/S23 family protein


Gene families : OG_01_0001602 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_14200V3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AT5G02960 No alias Ribosomal protein S12/S23 family protein 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504200 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g08680.1 No alias component RPS23 of SSU proteome 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05942.1 No alias component uS12 of SSU proteome 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 31 141
No external refs found!