AT1G09730

Description : Cysteine proteinases superfamily protein

Gene families : OG_01_0002941 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002941_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G09730
Cluster	HCCA: Cluster_224

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zci_15012.1	No alias	no annotation	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006401	RNA catabolic process	None	Extended
BP	GO:0006402	mRNA catabolic process	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	ISS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	ISS	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0016926	protein desumoylation	ISS	Interproscan
MF	GO:0016929	SUMO-specific protease activity	ISS	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IEP	HCCA
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	HCCA
CC	GO:0000109	nucleotide-excision repair complex	IEP	HCCA
CC	GO:0000110	nucleotide-excision repair factor 1 complex	IEP	HCCA
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
BP	GO:0000266	mitochondrial fission	IEP	HCCA
BP	GO:0000710	meiotic mismatch repair	IEP	HCCA
BP	GO:0000712	resolution of meiotic recombination intermediates	IEP	HCCA
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	HCCA
BP	GO:0000725	recombinational repair	IEP	HCCA
BP	GO:0000741	karyogamy	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004520	endodeoxyribonuclease activity	IEP	HCCA
MF	GO:0004536	deoxyribonuclease activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
CC	GO:0005963	magnesium-dependent protein serine/threonine phosphatase complex	IEP	HCCA
BP	GO:0006289	nucleotide-excision repair	IEP	HCCA
BP	GO:0006296	nucleotide-excision repair, DNA incision, 5'-to lesion	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006611	protein export from nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0006997	nucleus organization	IEP	HCCA
BP	GO:0007005	mitochondrion organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016559	peroxisome fission	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033683	nucleotide-excision repair, DNA incision	IEP	HCCA
CC	GO:0034399	nuclear periphery	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048284	organelle fusion	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
CC	GO:1990391	DNA repair complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003653	Peptidase_C48_C	441	628

External Links

PLAZA 3.0 Dicots	AT1G09730

AT1G09730

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation