AT2G28520


Description : vacuolar proton ATPase A1


Gene families : OG_01_0001146 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001146_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28520
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Pp3c13_3420V3.1 No alias vacuolar proton ATPase A3 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_10750V3.1 No alias vacuolar proton ATPase A3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09489.1 No alias subunit a of V-type ATPase membrane V0 subcomplex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09489.2 No alias subunit a of V-type ATPase membrane V0 subcomplex 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09489.3 No alias subunit a of V-type ATPase membrane V0 subcomplex 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
CC GO:0012510 trans-Golgi network transport vesicle membrane IDA Interproscan
MF GO:0016887 ATP hydrolysis activity ISS Interproscan
BP GO:0070070 proton-transporting V-type ATPase complex assembly IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005388 P-type calcium transporter activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006409 tRNA export from nucleus IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
MF GO:0008301 DNA binding, bending IEP HCCA
CC GO:0008305 integrin complex IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
MF GO:0008509 anion transmembrane transporter activity IEP HCCA
MF GO:0008511 sodium:potassium:chloride symporter activity IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
MF GO:0009674 potassium:sodium symporter activity IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015296 anion:cation symporter activity IEP HCCA
MF GO:0015370 solute:sodium symporter activity IEP HCCA
MF GO:0015373 anion:sodium symporter activity IEP HCCA
MF GO:0015377 cation:chloride symporter activity IEP HCCA
MF GO:0015378 sodium:chloride symporter activity IEP HCCA
MF GO:0015379 potassium:chloride symporter activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0018023 peptidyl-lysine trimethylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
MF GO:0031490 chromatin DNA binding IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
CC GO:0035097 histone methyltransferase complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
CC GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
CC GO:0043235 receptor complex IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
CC GO:0048188 Set1C/COMPASS complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0051031 tRNA transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
BP GO:0060776 simple leaf morphogenesis IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0080119 ER body organization IEP HCCA
BP GO:0080182 histone H3-K4 trimethylation IEP HCCA
BP GO:0097064 ncRNA export from nucleus IEP HCCA
CC GO:0098636 protein complex involved in cell adhesion IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098802 plasma membrane signaling receptor complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002490 V-ATPase_116kDa_su 37 814
PLAZA 3.0 Dicots AT2G28520