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  5. Pp3c7_21150V3.1

Pp3c7_21150V3.1


Description : Zinc-binding ribosomal protein family protein


Gene families : OG_01_0000991 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_21150V3.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT3G60245 No alias Zinc-binding ribosomal protein family protein 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g257150 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.35 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g08340.1 No alias component RPL37a of LSU proteome component 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g09590.1 No alias component RPL37a of LSU proteome component 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002674 Ribosomal_L37ae 4 88
No external refs found!