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  5. Pp3c7_8280V3.1

Pp3c7_8280V3.1


Description : No annotation


Gene families : OG_01_0000097 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_8280V3.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre02.g141606 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g145127 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre05.g244250 No alias Cytoskeleton.microtubular network.Dynein... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g392282 No alias Cytoskeleton.microtubular network.Dynein... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g403800 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre11.g476050 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g484250 No alias Cytoskeleton.microtubular network.Dynein... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g624950 No alias Cytoskeleton.microtubular network.Dynein... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g627576 No alias Cytoskeleton.microtubular network.Dynein... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g685450 No alias Cytoskeleton.microtubular network.Dynein... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g13570.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g13060.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0010970 transport along microtubule IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0042073 intraciliary transport IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0099111 microtubule-based transport IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024317 Dynein_heavy_chain_D4_dom 1553 1812
IPR041466 Dynein_AAA5_ext 1059 1185
IPR004273 Dynein_heavy_D6_P-loop 2655 2778
IPR035699 AAA_6 569 895
IPR041228 Dynein_C 2949 3259
IPR035706 AAA_9 2184 2402
IPR024743 Dynein_HC_stalk 1826 2159
IPR013602 Dynein_heavy_linker 36 437
IPR041589 DNAH3_AAA_lid_1 1404 1497
IPR041658 AAA_lid_11 2780 2942
No external refs found!