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  5. Pp3c8_15880V3.1

Pp3c8_15880V3.1


Description : No annotation


Gene families : OG_01_0005846 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_15880V3.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT3G14120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g425675 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g23360.1 No alias NUP107 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04827.1 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!