1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c8_21910V3.1

Pp3c8_21910V3.1


Description : Transketolase family protein


Gene families : OG_01_0003498 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003498_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_21910V3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G30120 No alias pyruvate dehydrogenase E1 beta 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G34590 No alias Transketolase family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g194200 No alias Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g00740.1 No alias subunit beta of E1 pyruvate dehydrogenase component 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 82 254
IPR033248 Transketolase_C 270 391
No external refs found!