1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c8_22480V3.1

Pp3c8_22480V3.1


Description : Ribosomal protein S7e family protein


Gene families : OG_01_0001699 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_22480V3.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G48830 No alias Ribosomal protein S7e family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G02560 No alias Ribosomal protein S7e family protein 0.4 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G16130 No alias Ribosomal protein S7e family protein 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g498900 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.41 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g08120.1 No alias component RPS7 of SSU proteome 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09851.1 No alias component eS7 of SSU proteome 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000554 Ribosomal_S7e 8 188
No external refs found!