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  5. Pp3c8_4010V3.1

Pp3c8_4010V3.1


Description : Surfeit locus protein 6


Gene families : OG_01_0005246 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005246_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_4010V3.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT5G05210 No alias Surfeit locus protein 6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre02.g082300 No alias No description available 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g16210.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR029190 Rrp14/SURF6_C 130 320
IPR029188 Rrp14_N 17 77
No external refs found!