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  5. Pp3c9_11100V3.1

Pp3c9_11100V3.1


Description : cleavage and polyadenylation specificity factor 100


Gene families : OG_01_0008785 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008785_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_11100V3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT5G23880 No alias cleavage and polyadenylation specificity factor 100 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g487600 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g01860.1 No alias component CPSF100/Ydh1 of Cleavage and Polyadenylation... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0008303 caspase complex IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!