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  5. Zci_01326.2

Zci_01326.2


Description : DNA topoisomerase (TOP2)


Gene families : OG_01_0001846 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_01326.2
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT3G23890 No alias topoisomerase II 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre01.g009250 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g13420.1 No alias DNA topoisomerase (TOP2) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_20260V3.1 No alias topoisomerase II 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_3610V3.1 No alias topoisomerase II 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004363 glutathione synthase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR013506 Topo_IIA_bsu_dom2 371 530
IPR031660 TOPRIM_C 675 803
IPR002205 Topo_IIA_A/C 805 1270
IPR003594 HATPase_C 179 324
IPR006171 TOPRIM_domain 561 659
No external refs found!