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  5. Zci_01381.1

Zci_01381.1


Description : component eS31 of SSU proteome


Gene families : OG_01_0001139 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_01381.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT2G47110 No alias ubiquitin 6 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G62250 No alias ubiquitin 5 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g12760.1 No alias component RPS27a of SSU proteome 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_5640V3.1 No alias ubiquitin 6 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_5760V3.1 No alias ubiquitin 6 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_19000V3.1 No alias ubiquitin 6 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_14230V3.1 No alias ubiquitin 6 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
MF GO:0042301 phosphate ion binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 ion homeostasis IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 cation homeostasis IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 45 116
IPR002906 Ribosomal_S27a 144 189
No external refs found!