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AT2G33410


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0015901 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G33410
Cluster HCCA: Cluster_166


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000098 sulfur amino acid catabolic process IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
CC GO:0000930 gamma-tubulin complex IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006333 chromatin assembly or disassembly IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0009093 cysteine catabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
CC GO:0009898 cytoplasmic side of plasma membrane IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010154 fruit development IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019448 L-cysteine catabolic process IEP HCCA
BP GO:0019450 L-cysteine catabolic process to pyruvate IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0046439 L-cysteine metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0080146 L-cysteine desulfhydrase activity IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098562 cytoplasmic side of membrane IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 112 169
IPR000504 RRM_dom 8 72
PLAZA 3.0 Dicots AT2G33410