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  5. Zci_01830.1

Zci_01830.1


Description : component uL18 of LSU proteome component


Gene families : OG_01_0001910 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_01830.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT3G25520 No alias ribosomal protein L5 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39740 No alias ribosomal protein L5 B 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g621450 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g15800.1 No alias component RPL5 of LSU proteome component 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_6420V3.1 No alias ribosomal protein L5 B 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_7160V3.1 No alias ribosomal protein L5 B 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_31540V3.1 No alias ribosomal protein L5 B 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_25660V3.1 No alias ribosomal protein L5 B 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
MF GO:0042301 phosphate ion binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR005485 Rbsml_L5_euk/L18_arc 16 177
IPR025607 Rbsml_L5e/L18P_C 196 285
No external refs found!