Coexpression cluster: Cluster_31 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003700 DNA-binding transcription factor activity 6.77% (9/133) 4.19 0.0 0.0
GO:0140110 transcription regulator activity 6.77% (9/133) 3.84 0.0 2e-06
GO:0050794 regulation of cellular process 9.77% (13/133) 2.87 0.0 2e-06
GO:0080090 regulation of primary metabolic process 8.27% (11/133) 3.12 0.0 3e-06
GO:0051171 regulation of nitrogen compound metabolic process 8.27% (11/133) 3.12 0.0 3e-06
GO:0031323 regulation of cellular metabolic process 8.27% (11/133) 3.09 0.0 3e-06
GO:0065007 biological regulation 9.77% (13/133) 2.72 0.0 3e-06
GO:0019222 regulation of metabolic process 8.27% (11/133) 3.01 0.0 4e-06
GO:0060255 regulation of macromolecule metabolic process 8.27% (11/133) 3.01 0.0 4e-06
GO:0050789 regulation of biological process 9.77% (13/133) 2.78 0.0 4e-06
GO:0009889 regulation of biosynthetic process 7.52% (10/133) 3.05 0.0 5e-06
GO:2000112 regulation of cellular macromolecule biosynthetic process 7.52% (10/133) 3.05 0.0 5e-06
GO:0031326 regulation of cellular biosynthetic process 7.52% (10/133) 3.05 0.0 5e-06
GO:0010556 regulation of macromolecule biosynthetic process 7.52% (10/133) 3.05 0.0 5e-06
GO:0019219 regulation of nucleobase-containing compound metabolic process 7.52% (10/133) 3.08 0.0 6e-06
GO:2001141 regulation of RNA biosynthetic process 7.52% (10/133) 3.09 0.0 6e-06
GO:1903506 regulation of nucleic acid-templated transcription 7.52% (10/133) 3.09 0.0 6e-06
GO:0051252 regulation of RNA metabolic process 7.52% (10/133) 3.09 0.0 6e-06
GO:0006355 regulation of transcription, DNA-templated 7.52% (10/133) 3.09 0.0 6e-06
GO:0010468 regulation of gene expression 7.52% (10/133) 2.99 1e-06 8e-06
GO:0043565 sequence-specific DNA binding 3.01% (4/133) 4.49 2.8e-05 0.000362
GO:0009733 response to auxin 2.26% (3/133) 4.97 0.000108 0.001337
GO:0010033 response to organic substance 2.26% (3/133) 4.61 0.000238 0.002586
GO:0009725 response to hormone 2.26% (3/133) 4.61 0.000238 0.002586
GO:0009719 response to endogenous stimulus 2.26% (3/133) 4.61 0.000238 0.002586
GO:0042221 response to chemical 2.26% (3/133) 3.69 0.001609 0.01683
GO:0016567 protein ubiquitination 2.26% (3/133) 3.65 0.001751 0.017637
GO:0032446 protein modification by small protein conjugation 2.26% (3/133) 3.57 0.002058 0.01999
GO:0005509 calcium ion binding 3.01% (4/133) 2.7 0.003409 0.031977
GO:0004842 ubiquitin-protein transferase activity 2.26% (3/133) 3.25 0.003844 0.03373
GO:0019787 ubiquitin-like protein transferase activity 2.26% (3/133) 3.25 0.003844 0.03373
GO:0008150 biological_process 27.07% (36/133) 0.62 0.0041 0.033793
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.5% (2/133) 4.38 0.004013 0.034115
GO:0034656 nucleobase-containing small molecule catabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:1901658 glycosyl compound catabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0004126 cytidine deaminase activity 0.75% (1/133) 7.19 0.006848 0.038015
GO:0072529 pyrimidine-containing compound catabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0046135 pyrimidine nucleoside catabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0006216 cytidine catabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0046131 pyrimidine ribonucleoside metabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0046087 cytidine metabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0042454 ribonucleoside catabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0006213 pyrimidine nucleoside metabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0009164 nucleoside catabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0009972 cytidine deamination 0.75% (1/133) 7.19 0.006848 0.038015
GO:0046133 pyrimidine ribonucleoside catabolic process 0.75% (1/133) 7.19 0.006848 0.038015
GO:0016740 transferase activity 12.03% (16/133) 1.03 0.005037 0.040298
GO:0070647 protein modification by small protein conjugation or removal 2.26% (3/133) 3.05 0.00573 0.043293
GO:0003674 molecular_function 42.86% (57/133) 0.42 0.005613 0.04362
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_19 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_30 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_46 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_56 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_67 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_81 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_84 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_93 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_94 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_96 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_97 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_121 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_140 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_143 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_146 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_155 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_184 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_212 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_215 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_216 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_231 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_236 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_237 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_8 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_17 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_18 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_19 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_21 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_29 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_34 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_35 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_36 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_48 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_50 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_58 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_59 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_62 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_65 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_78 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_89 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_101 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_106 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_111 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_115 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_124 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_129 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_140 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_147 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_156 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_161 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_173 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_176 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_15 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_17 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_39 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_41 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_50 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_63 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_86 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_110 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_153 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_155 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_163 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_167 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_168 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_172 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_204 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_209 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_212 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_218 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_249 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_260 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_284 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_159 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_161 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (133) (download table)

InterPro Domains

GO Terms

Family Terms