Coexpression cluster: Cluster_237 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0098542 defense response to other organism 22.0% (11/50) 2.71 1e-06 3.7e-05
GO:0009607 response to biotic stimulus 26.0% (13/50) 2.4 1e-06 4e-05
GO:0010941 regulation of cell death 16.0% (8/50) 3.45 1e-06 4.5e-05
GO:0043207 response to external biotic stimulus 26.0% (13/50) 2.4 1e-06 5.3e-05
GO:0080134 regulation of response to stress 18.0% (9/50) 3.19 1e-06 5.4e-05
GO:0016772 transferase activity, transferring phosphorus-containing groups 26.0% (13/50) 2.32 1e-06 5.7e-05
GO:0048583 regulation of response to stimulus 20.0% (10/50) 2.97 0.0 5.8e-05
GO:0031347 regulation of defense response 18.0% (9/50) 3.26 0.0 5.9e-05
GO:0016301 kinase activity 26.0% (13/50) 2.51 0.0 6.5e-05
GO:0009617 response to bacterium 16.0% (8/50) 3.2 2e-06 8.3e-05
GO:0044419 biological process involved in interspecies interaction between organisms 24.0% (12/50) 2.37 2e-06 8.8e-05
GO:0051707 response to other organism 24.0% (12/50) 2.38 2e-06 8.9e-05
GO:0000165 MAPK cascade 12.0% (6/50) 4.01 2e-06 9e-05
GO:0006952 defense response 26.0% (13/50) 2.52 0.0 0.000121
GO:0051668 localization within membrane 14.0% (7/50) 3.37 5e-06 0.000124
GO:0090150 establishment of protein localization to membrane 14.0% (7/50) 3.38 5e-06 0.000126
GO:0072657 protein localization to membrane 14.0% (7/50) 3.38 5e-06 0.000126
GO:0043903 regulation of biological process involved in symbiotic interaction 14.0% (7/50) 3.38 5e-06 0.000126
GO:0050776 regulation of immune response 14.0% (7/50) 3.32 6e-06 0.000131
GO:0002682 regulation of immune system process 14.0% (7/50) 3.32 6e-06 0.000131
GO:0080135 regulation of cellular response to stress 14.0% (7/50) 3.33 6e-06 0.000138
GO:0045088 regulation of innate immune response 14.0% (7/50) 3.32 6e-06 0.00014
GO:0043067 regulation of programmed cell death 14.0% (7/50) 3.29 7e-06 0.000144
GO:0010363 regulation of plant-type hypersensitive response 14.0% (7/50) 3.38 4e-06 0.000144
GO:0006612 protein targeting to membrane 14.0% (7/50) 3.39 4e-06 0.000151
GO:0002831 regulation of response to biotic stimulus 14.0% (7/50) 3.25 8e-06 0.000162
GO:0032101 regulation of response to external stimulus 14.0% (7/50) 3.24 9e-06 0.000166
GO:0035556 intracellular signal transduction 14.0% (7/50) 3.01 2.4e-05 0.000448
GO:0009605 response to external stimulus 26.0% (13/50) 1.86 3.5e-05 0.000621
GO:0042742 defense response to bacterium 12.0% (6/50) 3.18 5e-05 0.000858
GO:0007165 signal transduction 22.0% (11/50) 2.03 5.6e-05 0.000923
GO:0010200 response to chitin 12.0% (6/50) 2.98 0.000108 0.001737
GO:0010243 response to organonitrogen compound 12.0% (6/50) 2.91 0.000143 0.002223
GO:0006605 protein targeting 14.0% (7/50) 2.38 0.000365 0.005508
GO:0009863 salicylic acid mediated signaling pathway 10.0% (5/50) 2.99 0.000414 0.006062
GO:0033036 macromolecule localization 16.0% (8/50) 2.13 0.000432 0.00615
GO:0034613 cellular protein localization 14.0% (7/50) 2.22 0.000709 0.009832
GO:0002237 response to molecule of bacterial origin 6.0% (3/50) 4.04 0.000818 0.011044
GO:0005217 intracellular ligand-gated ion channel activity 4.0% (2/50) 5.53 0.000862 0.011338
GO:0070727 cellular macromolecule localization 14.0% (7/50) 2.16 0.000909 0.011653
GO:0016740 transferase activity 26.0% (13/50) 1.35 0.001222 0.011825
GO:0006874 cellular calcium ion homeostasis 4.0% (2/50) 5.25 0.001261 0.011976
GO:0009693 ethylene biosynthetic process 6.0% (3/50) 3.84 0.001221 0.012044
GO:1900674 olefin biosynthetic process 6.0% (3/50) 3.84 0.001221 0.012044
GO:1900673 olefin metabolic process 6.0% (3/50) 3.84 0.001221 0.012044
GO:0043449 cellular alkene metabolic process 6.0% (3/50) 3.84 0.001221 0.012044
GO:0043450 alkene biosynthetic process 6.0% (3/50) 3.84 0.001221 0.012044
GO:0009692 ethylene metabolic process 6.0% (3/50) 3.84 0.001221 0.012044
GO:0009627 systemic acquired resistance 8.0% (4/50) 3.19 0.000975 0.012204
GO:0050794 regulation of cellular process 32.0% (16/50) 1.17 0.001122 0.012514
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 8.0% (4/50) 3.14 0.001099 0.012534
GO:0015276 ligand-gated ion channel activity 4.0% (2/50) 5.16 0.001441 0.012741
GO:0022834 ligand-gated channel activity 4.0% (2/50) 5.16 0.001441 0.012741
GO:1901698 response to nitrogen compound 12.0% (6/50) 2.35 0.001096 0.012776
GO:0065007 biological regulation 38.0% (19/50) 1.03 0.001058 0.012922
GO:0008104 protein localization 14.0% (7/50) 2.03 0.001521 0.013001
GO:0015031 protein transport 14.0% (7/50) 2.04 0.001422 0.013031
GO:0045184 establishment of protein localization 14.0% (7/50) 2.04 0.001422 0.013031
GO:0006886 intracellular protein transport 14.0% (7/50) 2.11 0.001093 0.013035
GO:0031348 negative regulation of defense response 8.0% (4/50) 3.0 0.001559 0.013107
GO:0010033 response to organic substance 22.0% (11/50) 1.47 0.001591 0.013164
GO:0050896 response to stimulus 40.0% (20/50) 0.94 0.001517 0.013191
GO:0055074 calcium ion homeostasis 4.0% (2/50) 5.07 0.001632 0.013289
GO:0009867 jasmonic acid mediated signaling pathway 8.0% (4/50) 2.97 0.001686 0.013514
GO:0003948 N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity 2.0% (1/50) 9.11 0.001808 0.013843
GO:0045792 negative regulation of cell size 2.0% (1/50) 9.11 0.001808 0.013843
GO:0120251 hydrocarbon biosynthetic process 6.0% (3/50) 3.64 0.001807 0.014261
GO:0120252 hydrocarbon metabolic process 6.0% (3/50) 3.58 0.002049 0.015458
GO:0009751 response to salicylic acid 6.0% (3/50) 3.56 0.002134 0.015866
GO:0051606 detection of stimulus 6.0% (3/50) 3.53 0.002266 0.016603
GO:0046907 intracellular transport 14.0% (7/50) 1.92 0.002314 0.016717
GO:0050832 defense response to fungus 8.0% (4/50) 2.82 0.00249 0.017739
GO:0120255 olefinic compound biosynthetic process 6.0% (3/50) 3.46 0.002592 0.018213
GO:0009625 response to insect 4.0% (2/50) 4.62 0.003018 0.020921
GO:0120254 olefinic compound metabolic process 6.0% (3/50) 3.37 0.003106 0.021245
GO:0072503 cellular divalent inorganic cation homeostasis 4.0% (2/50) 4.59 0.003151 0.021272
GO:0072330 monocarboxylic acid biosynthetic process 10.0% (5/50) 2.3 0.003422 0.022506
GO:0030003 cellular cation homeostasis 6.0% (3/50) 3.32 0.003385 0.022551
GO:0051649 establishment of localization in cell 14.0% (7/50) 1.8 0.003715 0.024122
GO:0006873 cellular ion homeostasis 6.0% (3/50) 3.25 0.003925 0.025167
GO:0006950 response to stress 28.0% (14/50) 1.09 0.004022 0.02547
GO:0055082 cellular chemical homeostasis 6.0% (3/50) 3.21 0.00418 0.026153
GO:0072507 divalent inorganic cation homeostasis 4.0% (2/50) 4.36 0.004317 0.026366
GO:0048585 negative regulation of response to stimulus 8.0% (4/50) 2.6 0.004303 0.026596
GO:0010310 regulation of hydrogen peroxide metabolic process 6.0% (3/50) 3.16 0.004652 0.028077
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 2.0% (1/50) 7.53 0.005414 0.031563
GO:0004067 asparaginase activity 2.0% (1/50) 7.53 0.005414 0.031563
GO:0019725 cellular homeostasis 6.0% (3/50) 3.08 0.00538 0.03209
GO:0022836 gated channel activity 4.0% (2/50) 4.16 0.005653 0.032583
GO:2000377 regulation of reactive oxygen species metabolic process 6.0% (3/50) 3.04 0.005847 0.032963
GO:0050789 regulation of biological process 32.0% (16/50) 0.93 0.005952 0.033191
GO:0012501 programmed cell death 4.0% (2/50) 4.13 0.005831 0.033239
GO:0051641 cellular localization 14.0% (7/50) 1.67 0.006079 0.033534
GO:0009697 salicylic acid biosynthetic process 6.0% (3/50) 3.0 0.006339 0.034593
GO:0055080 cation homeostasis 6.0% (3/50) 2.98 0.006508 0.035142
GO:0046658 anchored component of plasma membrane 4.0% (2/50) 4.02 0.006763 0.036139
GO:0006516 glycoprotein catabolic process 2.0% (1/50) 7.11 0.007213 0.036276
GO:0033345 asparagine catabolic process via L-aspartate 2.0% (1/50) 7.11 0.007213 0.036276
GO:0006530 asparagine catabolic process 2.0% (1/50) 7.11 0.007213 0.036276
GO:0048281 inflorescence morphogenesis 2.0% (1/50) 7.11 0.007213 0.036276
GO:0009696 salicylic acid metabolic process 6.0% (3/50) 2.94 0.007031 0.037185
GO:0046189 phenol-containing compound biosynthetic process 6.0% (3/50) 2.93 0.007211 0.037747
GO:0071702 organic substance transport 16.0% (8/50) 1.46 0.007657 0.038138
GO:0009620 response to fungus 8.0% (4/50) 2.34 0.007987 0.038652
GO:0003674 molecular_function 88.0% (44/50) 0.28 0.007934 0.038763
GO:0071705 nitrogen compound transport 16.0% (8/50) 1.46 0.007882 0.038878
GO:0050801 ion homeostasis 6.0% (3/50) 2.86 0.008249 0.03955
GO:0018958 phenol-containing compound metabolic process 6.0% (3/50) 2.85 0.008348 0.039651
GO:0009755 hormone-mediated signaling pathway 10.0% (5/50) 1.98 0.008436 0.039701
GO:0006875 cellular metal ion homeostasis 4.0% (2/50) 3.83 0.008813 0.041103
GO:0015846 polyamine transport 2.0% (1/50) 6.79 0.009008 0.04126
GO:0015203 polyamine transmembrane transporter activity 2.0% (1/50) 6.79 0.009008 0.04126
GO:2000022 regulation of jasmonic acid mediated signaling pathway 2.0% (1/50) 6.53 0.0108 0.04903
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_4 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_6 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_7 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_21 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_28 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_29 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_41 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_46 0.071 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_48 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_50 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_56 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_64 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_69 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_79 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_81 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_82 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_93 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_94 0.059 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_95 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_105 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_118 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_120 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_121 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_125 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_126 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_136 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_140 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_143 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_144 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_146 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_163 0.045 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_168 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_169 0.047 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_174 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_177 0.056 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_188 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_206 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_215 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_231 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_243 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_244 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_246 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_248 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_260 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_113 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_31 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_88 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_111 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_173 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_50 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_163 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_229 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_281 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_294 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_117 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_129 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_137 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_252 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms