Coexpression cluster: Cluster_192 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051168 nuclear export 13.7% (10/73) 5.74 0.0 0.0
GO:0006406 mRNA export from nucleus 12.33% (9/73) 5.8 0.0 0.0
GO:0051028 mRNA transport 12.33% (9/73) 5.8 0.0 0.0
GO:0006913 nucleocytoplasmic transport 15.07% (11/73) 4.82 0.0 0.0
GO:0051169 nuclear transport 15.07% (11/73) 4.82 0.0 0.0
GO:0050657 nucleic acid transport 12.33% (9/73) 5.65 0.0 0.0
GO:0050658 RNA transport 12.33% (9/73) 5.65 0.0 0.0
GO:0051236 establishment of RNA localization 12.33% (9/73) 5.65 0.0 0.0
GO:0006405 RNA export from nucleus 12.33% (9/73) 5.65 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 39.73% (29/73) 2.2 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 19.18% (14/73) 3.82 0.0 0.0
GO:0015931 nucleobase-containing compound transport 13.7% (10/73) 4.92 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 15.07% (11/73) 4.19 0.0 0.0
GO:0046483 heterocycle metabolic process 39.73% (29/73) 1.97 0.0 0.0
GO:0090304 nucleic acid metabolic process 32.88% (24/73) 2.3 0.0 0.0
GO:0043170 macromolecule metabolic process 49.32% (36/73) 1.59 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 39.73% (29/73) 1.89 0.0 0.0
GO:0016070 RNA metabolic process 27.4% (20/73) 2.45 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 39.73% (29/73) 1.82 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 39.73% (29/73) 1.75 0.0 0.0
GO:0006807 nitrogen compound metabolic process 49.32% (36/73) 1.42 0.0 0.0
GO:0006606 protein import into nucleus 9.59% (7/73) 4.79 0.0 0.0
GO:0034504 protein localization to nucleus 9.59% (7/73) 4.76 0.0 0.0
GO:0051170 import into nucleus 9.59% (7/73) 4.74 0.0 0.0
GO:0032501 multicellular organismal process 27.4% (20/73) 2.04 0.0 1e-06
GO:0005829 cytosol 24.66% (18/73) 2.19 0.0 1e-06
GO:0007275 multicellular organism development 19.18% (14/73) 2.6 0.0 2e-06
GO:0044238 primary metabolic process 52.05% (38/73) 1.18 0.0 2e-06
GO:0009793 embryo development ending in seed dormancy 15.07% (11/73) 2.98 0.0 4e-06
GO:0009790 embryo development 15.07% (11/73) 2.98 0.0 4e-06
GO:0048856 anatomical structure development 26.03% (19/73) 1.99 0.0 4e-06
GO:0022414 reproductive process 28.77% (21/73) 1.83 0.0 5e-06
GO:0009933 meristem structural organization 8.22% (6/73) 4.58 0.0 5e-06
GO:0050826 response to freezing 8.22% (6/73) 4.57 0.0 5e-06
GO:0003006 developmental process involved in reproduction 26.03% (19/73) 1.95 0.0 6e-06
GO:0048532 anatomical structure arrangement 8.22% (6/73) 4.49 0.0 7e-06
GO:0019915 lipid storage 8.22% (6/73) 4.48 0.0 7e-06
GO:0009909 regulation of flower development 12.33% (9/73) 3.26 0.0 9e-06
GO:0048580 regulation of post-embryonic development 13.7% (10/73) 3.0 0.0 1e-05
GO:2000026 regulation of multicellular organismal development 13.7% (10/73) 2.98 1e-06 1.1e-05
GO:0048831 regulation of shoot system development 12.33% (9/73) 3.2 1e-06 1.1e-05
GO:0051235 maintenance of location 8.22% (6/73) 4.3 1e-06 1.2e-05
GO:0016043 cellular component organization 28.77% (21/73) 1.73 1e-06 1.2e-05
GO:0010182 sugar mediated signaling pathway 8.22% (6/73) 4.32 1e-06 1.2e-05
GO:0009756 carbohydrate mediated signaling 8.22% (6/73) 4.32 1e-06 1.2e-05
GO:0006396 RNA processing 16.44% (12/73) 2.54 1e-06 1.6e-05
GO:0051239 regulation of multicellular organismal process 13.7% (10/73) 2.87 1e-06 1.9e-05
GO:0044260 cellular macromolecule metabolic process 34.25% (25/73) 1.46 1e-06 2.1e-05
GO:0010228 vegetative to reproductive phase transition of meristem 10.96% (8/73) 3.35 1e-06 2.1e-05
GO:0017038 protein import 9.59% (7/73) 3.67 1e-06 2.3e-05
GO:0032502 developmental process 34.25% (25/73) 1.45 1e-06 2.4e-05
GO:0022402 cell cycle process 13.7% (10/73) 2.8 2e-06 2.7e-05
GO:2000241 regulation of reproductive process 12.33% (9/73) 2.99 2e-06 3e-05
GO:0007062 sister chromatid cohesion 8.22% (6/73) 4.01 2e-06 3.2e-05
GO:0048609 multicellular organismal reproductive process 9.59% (7/73) 3.54 2e-06 3.7e-05
GO:0071840 cellular component organization or biogenesis 28.77% (21/73) 1.61 2e-06 3.7e-05
GO:0071704 organic substance metabolic process 52.05% (38/73) 0.98 3e-06 3.9e-05
GO:0007389 pattern specification process 10.96% (8/73) 3.16 3e-06 4.6e-05
GO:0009987 cellular process 63.01% (46/73) 0.79 4e-06 5.3e-05
GO:0010162 seed dormancy process 8.22% (6/73) 3.86 4e-06 5.3e-05
GO:0022611 dormancy process 8.22% (6/73) 3.85 4e-06 5.4e-05
GO:0034654 nucleobase-containing compound biosynthetic process 13.7% (10/73) 2.64 4e-06 5.8e-05
GO:0010431 seed maturation 5.48% (4/73) 5.14 5e-06 6.8e-05
GO:0009845 seed germination 8.22% (6/73) 3.77 5e-06 7.1e-05
GO:0010072 primary shoot apical meristem specification 5.48% (4/73) 5.11 6e-06 7.3e-05
GO:0009880 embryonic pattern specification 5.48% (4/73) 5.04 7e-06 8.6e-05
GO:0008152 metabolic process 53.42% (39/73) 0.9 7e-06 8.8e-05
GO:0009639 response to red or far red light 10.96% (8/73) 2.97 8e-06 0.000103
GO:0090421 embryonic meristem initiation 5.48% (4/73) 4.92 9e-06 0.000113
GO:0005635 nuclear envelope 5.48% (4/73) 4.92 9e-06 0.000113
GO:0005488 binding 43.84% (32/73) 1.05 1e-05 0.000125
GO:0016567 protein ubiquitination 8.22% (6/73) 3.57 1.2e-05 0.000141
GO:0046907 intracellular transport 16.44% (12/73) 2.15 1.4e-05 0.000164
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 5.48% (4/73) 4.73 1.6e-05 0.000181
GO:0005643 nuclear pore 4.11% (3/73) 5.9 1.7e-05 0.000187
GO:0050793 regulation of developmental process 15.07% (11/73) 2.26 1.7e-05 0.000191
GO:0045595 regulation of cell differentiation 5.48% (4/73) 4.66 1.9e-05 0.000214
GO:0009640 photomorphogenesis 8.22% (6/73) 3.44 2e-05 0.000216
GO:0032446 protein modification by small protein conjugation 8.22% (6/73) 3.43 2e-05 0.000219
GO:0009791 post-embryonic development 12.33% (9/73) 2.56 2.1e-05 0.000223
GO:0034062 5'-3' RNA polymerase activity 5.48% (4/73) 4.59 2.4e-05 0.000244
GO:0097747 RNA polymerase activity 5.48% (4/73) 4.59 2.4e-05 0.000244
GO:0044237 cellular metabolic process 47.95% (35/73) 0.92 2.5e-05 0.00025
GO:0051276 chromosome organization 8.22% (6/73) 3.32 3.1e-05 0.00031
GO:0051649 establishment of localization in cell 16.44% (12/73) 2.03 3.3e-05 0.000325
GO:0016779 nucleotidyltransferase activity 6.85% (5/73) 3.74 3.8e-05 0.000371
GO:0010564 regulation of cell cycle process 6.85% (5/73) 3.73 3.9e-05 0.000379
GO:1901363 heterocyclic compound binding 27.4% (20/73) 1.38 4.7e-05 0.000448
GO:0048825 cotyledon development 5.48% (4/73) 4.34 4.7e-05 0.000453
GO:0097159 organic cyclic compound binding 27.4% (20/73) 1.37 5.2e-05 0.000486
GO:0018130 heterocycle biosynthetic process 15.07% (11/73) 2.08 5.3e-05 0.00049
GO:0032259 methylation 10.96% (8/73) 2.59 5.6e-05 0.0005
GO:0043414 macromolecule methylation 10.96% (8/73) 2.59 5.6e-05 0.0005
GO:0016441 posttranscriptional gene silencing 6.85% (5/73) 3.62 5.6e-05 0.00051
GO:0005634 nucleus 56.16% (41/73) 0.74 5.8e-05 0.000519
GO:0051641 cellular localization 16.44% (12/73) 1.9 7.8e-05 0.00069
GO:0010629 negative regulation of gene expression 9.59% (7/73) 2.75 8.2e-05 0.000714
GO:0044271 cellular nitrogen compound biosynthetic process 16.44% (12/73) 1.89 8.4e-05 0.000725
GO:0051128 regulation of cellular component organization 8.22% (6/73) 3.06 8.6e-05 0.000731
GO:0033043 regulation of organelle organization 6.85% (5/73) 3.48 8.9e-05 0.000742
GO:0048366 leaf development 6.85% (5/73) 3.48 8.9e-05 0.000742
GO:0010014 meristem initiation 6.85% (5/73) 3.47 9.1e-05 0.000755
GO:0007155 cell adhesion 5.48% (4/73) 4.07 9.6e-05 0.000781
GO:0022610 biological adhesion 5.48% (4/73) 4.07 9.6e-05 0.000781
GO:0006259 DNA metabolic process 10.96% (8/73) 2.44 0.00011 0.000883
GO:0051726 regulation of cell cycle 8.22% (6/73) 2.97 0.000122 0.000969
GO:0071695 anatomical structure maturation 6.85% (5/73) 3.37 0.000125 0.00099
GO:0070647 protein modification by small protein conjugation or removal 8.22% (6/73) 2.94 0.000133 0.001043
GO:0051301 cell division 5.48% (4/73) 3.94 0.000139 0.001079
GO:0045010 actin nucleation 5.48% (4/73) 3.91 0.00015 0.001155
GO:0021700 developmental maturation 6.85% (5/73) 3.29 0.000165 0.001253
GO:0010605 negative regulation of macromolecule metabolic process 10.96% (8/73) 2.31 0.000211 0.001591
GO:0072594 establishment of protein localization to organelle 9.59% (7/73) 2.51 0.000233 0.001746
GO:0033365 protein localization to organelle 9.59% (7/73) 2.5 0.000243 0.001799
GO:0004812 aminoacyl-tRNA ligase activity 4.11% (3/73) 4.6 0.000263 0.001869
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.11% (3/73) 4.6 0.000263 0.001869
GO:0006418 tRNA aminoacylation for protein translation 4.11% (3/73) 4.6 0.000263 0.001869
GO:0043038 amino acid activation 4.11% (3/73) 4.6 0.000263 0.001869
GO:0043039 tRNA aminoacylation 4.11% (3/73) 4.6 0.000263 0.001869
GO:0007049 cell cycle 6.85% (5/73) 3.11 0.000289 0.002015
GO:0009892 negative regulation of metabolic process 10.96% (8/73) 2.24 0.000288 0.002027
GO:0010608 posttranscriptional regulation of gene expression 6.85% (5/73) 3.06 0.00034 0.002356
GO:1901265 nucleoside phosphate binding 12.33% (9/73) 2.01 0.000372 0.002517
GO:0000166 nucleotide binding 12.33% (9/73) 2.01 0.000372 0.002517
GO:0035196 production of miRNAs involved in gene silencing by miRNA 5.48% (4/73) 3.57 0.000372 0.002557
GO:0016579 protein deubiquitination 4.11% (3/73) 4.4 0.000397 0.002623
GO:0009314 response to radiation 15.07% (11/73) 1.75 0.000395 0.002631
GO:0010090 trichome morphogenesis 5.48% (4/73) 3.54 0.000395 0.002648
GO:0003723 RNA binding 9.59% (7/73) 2.37 0.000416 0.002724
GO:0010074 maintenance of meristem identity 4.11% (3/73) 4.34 0.000442 0.002876
GO:0006996 organelle organization 15.07% (11/73) 1.7 0.000509 0.00326
GO:0034645 cellular macromolecule biosynthetic process 15.07% (11/73) 1.7 0.000509 0.00326
GO:0030422 production of siRNA involved in RNA interference 5.48% (4/73) 3.44 0.000522 0.003319
GO:0070918 production of small RNA involved in gene silencing by RNA 5.48% (4/73) 3.41 0.000566 0.003541
GO:0031050 dsRNA processing 5.48% (4/73) 3.41 0.000566 0.003541
GO:0006886 intracellular protein transport 12.33% (9/73) 1.93 0.000578 0.00359
GO:0004386 helicase activity 4.11% (3/73) 4.17 0.000625 0.003858
GO:0019827 stem cell population maintenance 4.11% (3/73) 4.13 0.000685 0.004166
GO:0098727 maintenance of cell number 4.11% (3/73) 4.13 0.000685 0.004166
GO:0007015 actin filament organization 5.48% (4/73) 3.3 0.000747 0.004507
GO:0016246 RNA interference 4.11% (3/73) 4.06 0.000782 0.004686
GO:0015031 protein transport 12.33% (9/73) 1.86 0.0008 0.004695
GO:0045184 establishment of protein localization 12.33% (9/73) 1.86 0.0008 0.004695
GO:0008380 RNA splicing 6.85% (5/73) 2.79 0.000798 0.00475
GO:0031047 gene silencing by RNA 5.48% (4/73) 3.24 0.000861 0.005018
GO:0008104 protein localization 12.33% (9/73) 1.84 0.000869 0.005028
GO:0009165 nucleotide biosynthetic process 6.85% (5/73) 2.76 0.000879 0.005055
GO:1901293 nucleoside phosphate biosynthetic process 6.85% (5/73) 2.75 0.000893 0.005101
GO:0000278 mitotic cell cycle 5.48% (4/73) 3.23 0.000902 0.005115
GO:0071702 organic substance transport 16.44% (12/73) 1.5 0.000949 0.005347
GO:0048519 negative regulation of biological process 13.7% (10/73) 1.7 0.000962 0.005382
GO:0043412 macromolecule modification 17.81% (13/73) 1.42 0.000978 0.005435
GO:0071705 nitrogen compound transport 16.44% (12/73) 1.5 0.000991 0.005473
GO:0019538 protein metabolic process 21.92% (16/73) 1.22 0.001055 0.005789
GO:1901564 organonitrogen compound metabolic process 28.77% (21/73) 1.0 0.001071 0.005838
GO:0031507 heterochromatin assembly 5.48% (4/73) 3.13 0.00115 0.006231
GO:0035194 post-transcriptional gene silencing by RNA 4.11% (3/73) 3.86 0.001165 0.006269
GO:0070828 heterochromatin organization 5.48% (4/73) 3.12 0.001175 0.006285
GO:0006351 transcription, DNA-templated 5.48% (4/73) 3.11 0.001226 0.006473
GO:0097659 nucleic acid-templated transcription 5.48% (4/73) 3.11 0.001226 0.006473
GO:0140101 catalytic activity, acting on a tRNA 4.11% (3/73) 3.83 0.001253 0.006496
GO:0045814 negative regulation of gene expression, epigenetic 5.48% (4/73) 3.1 0.001252 0.006528
GO:0097435 supramolecular fiber organization 5.48% (4/73) 3.1 0.001252 0.006528
GO:0009409 response to cold 9.59% (7/73) 2.08 0.00133 0.006855
GO:0033036 macromolecule localization 12.33% (9/73) 1.75 0.00136 0.006963
GO:0016874 ligase activity 5.48% (4/73) 3.06 0.001387 0.007059
GO:0009059 macromolecule biosynthetic process 15.07% (11/73) 1.52 0.001459 0.007385
GO:0019438 aromatic compound biosynthetic process 13.7% (10/73) 1.61 0.001507 0.00758
GO:0003002 regionalization 5.48% (4/73) 3.02 0.001532 0.007658
GO:0034613 cellular protein localization 10.96% (8/73) 1.86 0.001566 0.007738
GO:0140513 nuclear protein-containing complex 5.48% (4/73) 3.01 0.001562 0.007763
GO:0048827 phyllome development 6.85% (5/73) 2.55 0.001677 0.008237
GO:1901362 organic cyclic compound biosynthetic process 15.07% (11/73) 1.49 0.001698 0.008294
GO:1905393 plant organ formation 5.48% (4/73) 2.97 0.001752 0.008507
GO:0036211 protein modification process 15.07% (11/73) 1.48 0.001838 0.008827
GO:0006464 cellular protein modification process 15.07% (11/73) 1.48 0.001838 0.008827
GO:0040029 regulation of gene expression, epigenetic 5.48% (4/73) 2.91 0.001993 0.009515
GO:0070727 cellular macromolecule localization 10.96% (8/73) 1.8 0.00204 0.009685
GO:0006508 proteolysis 10.96% (8/73) 1.8 0.002084 0.009839
GO:0043687 post-translational protein modification 4.11% (3/73) 3.57 0.002115 0.009926
GO:1901576 organic substance biosynthetic process 27.4% (20/73) 0.96 0.002169 0.010128
GO:0010498 proteasomal protein catabolic process 5.48% (4/73) 2.86 0.002256 0.010476
GO:0009616 RNAi-mediated antiviral immune response 4.11% (3/73) 3.49 0.002443 0.011281
GO:0036094 small molecule binding 12.33% (9/73) 1.62 0.002473 0.011357
GO:0036292 DNA rewinding 1.37% (1/73) 8.57 0.00264 0.01138
GO:0004141 dethiobiotin synthase activity 1.37% (1/73) 8.57 0.00264 0.01138
GO:0043388 positive regulation of DNA binding 1.37% (1/73) 8.57 0.00264 0.01138
GO:0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity 1.37% (1/73) 8.57 0.00264 0.01138
GO:0051099 positive regulation of binding 1.37% (1/73) 8.57 0.00264 0.01138
GO:0006431 methionyl-tRNA aminoacylation 1.37% (1/73) 8.57 0.00264 0.01138
GO:0022829 wide pore channel activity 1.37% (1/73) 8.57 0.00264 0.01138
GO:0015288 porin activity 1.37% (1/73) 8.57 0.00264 0.01138
GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA 1.37% (1/73) 8.57 0.00264 0.01138
GO:0070922 small RNA loading onto RISC 1.37% (1/73) 8.57 0.00264 0.01138
GO:0003876 AMP deaminase activity 1.37% (1/73) 8.57 0.00264 0.01138
GO:0047623 adenosine-phosphate deaminase activity 1.37% (1/73) 8.57 0.00264 0.01138
GO:0007267 cell-cell signaling 4.11% (3/73) 3.44 0.002728 0.0117
GO:0023052 signaling 4.11% (3/73) 3.42 0.002802 0.011957
GO:0006399 tRNA metabolic process 4.11% (3/73) 3.41 0.002877 0.012217
GO:0098542 defense response to other organism 10.96% (8/73) 1.71 0.003076 0.012997
GO:0009058 biosynthetic process 27.4% (20/73) 0.91 0.003123 0.01313
GO:0010267 production of ta-siRNAs involved in RNA interference 4.11% (3/73) 3.36 0.003191 0.01335
GO:0045087 innate immune response 5.48% (4/73) 2.71 0.003341 0.013907
GO:0009416 response to light stimulus 12.33% (9/73) 1.55 0.003533 0.014635
GO:0006955 immune response 5.48% (4/73) 2.67 0.003659 0.015083
GO:0030163 protein catabolic process 5.48% (4/73) 2.62 0.004174 0.017122
GO:0006397 mRNA processing 4.11% (3/73) 3.17 0.004553 0.018497
GO:0006346 DNA methylation-dependent heterochromatin assembly 4.11% (3/73) 3.17 0.004553 0.018497
GO:0009117 nucleotide metabolic process 8.22% (6/73) 1.95 0.004638 0.01875
GO:0006753 nucleoside phosphate metabolic process 8.22% (6/73) 1.94 0.004752 0.019122
GO:0006325 chromatin organization 5.48% (4/73) 2.54 0.005001 0.020029
GO:0000904 cell morphogenesis involved in differentiation 6.85% (5/73) 2.17 0.005139 0.020483
GO:0010390 histone monoubiquitination 1.37% (1/73) 7.57 0.005272 0.020531
GO:0004825 methionine-tRNA ligase activity 1.37% (1/73) 7.57 0.005272 0.020531
GO:0006723 cuticle hydrocarbon biosynthetic process 1.37% (1/73) 7.57 0.005272 0.020531
GO:0051101 regulation of DNA binding 1.37% (1/73) 7.57 0.005272 0.020531
GO:0051179 localization 21.92% (16/73) 0.99 0.005227 0.020737
GO:0006950 response to stress 24.66% (18/73) 0.91 0.005403 0.020846
GO:0070646 protein modification by small protein removal 4.11% (3/73) 3.08 0.005403 0.020942
GO:0009560 embryo sac egg cell differentiation 4.11% (3/73) 3.04 0.005861 0.022511
GO:0048449 floral organ formation 4.11% (3/73) 3.02 0.006098 0.023318
GO:0099402 plant organ development 8.22% (6/73) 1.86 0.006251 0.023794
GO:0016571 histone methylation 5.48% (4/73) 2.41 0.006888 0.026101
GO:0032559 adenyl ribonucleotide binding 6.85% (5/73) 2.06 0.00696 0.026138
GO:0030554 adenyl nucleotide binding 6.85% (5/73) 2.06 0.00696 0.026138
GO:0006479 protein methylation 5.48% (4/73) 2.4 0.007142 0.026586
GO:0008213 protein alkylation 5.48% (4/73) 2.4 0.007142 0.026586
GO:0050789 regulation of biological process 28.77% (21/73) 0.78 0.007174 0.026588
GO:0005515 protein binding 16.44% (12/73) 1.14 0.007423 0.02739
GO:0140546 defense response to symbiont 4.11% (3/73) 2.91 0.007508 0.027463
GO:0051607 defense response to virus 4.11% (3/73) 2.91 0.007508 0.027463
GO:0009630 gravitropism 4.11% (3/73) 2.88 0.007923 0.028011
GO:0048569 post-embryonic animal organ development 1.37% (1/73) 6.98 0.007898 0.028043
GO:0016882 cyclo-ligase activity 1.37% (1/73) 6.98 0.007898 0.028043
GO:0006768 biotin metabolic process 1.37% (1/73) 6.98 0.007898 0.028043
GO:0009102 biotin biosynthetic process 1.37% (1/73) 6.98 0.007898 0.028043
GO:0007009 plasma membrane organization 1.37% (1/73) 6.98 0.007898 0.028043
GO:0006611 protein export from nucleus 1.37% (1/73) 6.98 0.007898 0.028043
GO:0030089 phycobilisome 1.37% (1/73) 6.98 0.007898 0.028043
GO:0044281 small molecule metabolic process 19.18% (14/73) 1.01 0.008101 0.028523
GO:0055086 nucleobase-containing small molecule metabolic process 8.22% (6/73) 1.77 0.008416 0.029265
GO:0043247 telomere maintenance in response to DNA damage 2.74% (2/73) 3.86 0.008368 0.029341
GO:0032774 RNA biosynthetic process 5.48% (4/73) 2.33 0.00841 0.029364
GO:0048646 anatomical structure formation involved in morphogenesis 5.48% (4/73) 2.32 0.008602 0.029789
GO:0044249 cellular biosynthetic process 23.29% (17/73) 0.88 0.008715 0.030056
GO:0032204 regulation of telomere maintenance 2.74% (2/73) 3.81 0.009 0.030916
GO:0009629 response to gravity 4.11% (3/73) 2.81 0.009094 0.031113
GO:0043231 intracellular membrane-bounded organelle 73.97% (54/73) 0.3 0.009178 0.031272
GO:0043227 membrane-bounded organelle 73.97% (54/73) 0.3 0.00927 0.031459
GO:0006094 gluconeogenesis 4.11% (3/73) 2.79 0.009402 0.03178
GO:0060255 regulation of macromolecule metabolic process 17.81% (13/73) 1.04 0.009506 0.032003
GO:0009606 tropism 4.11% (3/73) 2.78 0.009716 0.032581
GO:0019319 hexose biosynthetic process 4.11% (3/73) 2.77 0.009876 0.032984
GO:0048522 positive regulation of cellular process 8.22% (6/73) 1.71 0.010042 0.033406
GO:0006305 DNA alkylation 4.11% (3/73) 2.73 0.010528 0.034216
GO:0006306 DNA methylation 4.11% (3/73) 2.73 0.010528 0.034216
GO:0016574 histone ubiquitination 1.37% (1/73) 6.57 0.010518 0.034447
GO:0033523 histone H2B ubiquitination 1.37% (1/73) 6.57 0.010518 0.034447
GO:0010449 root meristem growth 1.37% (1/73) 6.57 0.010518 0.034447
GO:0051082 unfolded protein binding 1.37% (1/73) 6.57 0.010518 0.034447
GO:0001510 RNA methylation 4.11% (3/73) 2.72 0.010695 0.034493
GO:0044267 cellular protein metabolic process 15.07% (11/73) 1.14 0.010687 0.034599
GO:0044728 DNA methylation or demethylation 4.11% (3/73) 2.72 0.010863 0.034903
GO:0006304 DNA modification 4.11% (3/73) 2.71 0.011033 0.035315
GO:0005996 monosaccharide metabolic process 5.48% (4/73) 2.21 0.011138 0.035514
GO:0032200 telomere organization 2.74% (2/73) 3.61 0.011733 0.037134
GO:0000723 telomere maintenance 2.74% (2/73) 3.61 0.011733 0.037134
GO:0065007 biological regulation 30.14% (22/73) 0.69 0.0119 0.037521
GO:0009615 response to virus 4.11% (3/73) 2.65 0.012266 0.038389
GO:0046364 monosaccharide biosynthetic process 4.11% (3/73) 2.65 0.012266 0.038389
GO:0043229 intracellular organelle 73.97% (54/73) 0.28 0.012419 0.038724
GO:0070085 glycosylation 4.11% (3/73) 2.63 0.012632 0.038816
GO:0006486 protein glycosylation 4.11% (3/73) 2.63 0.012632 0.038816
GO:0043413 macromolecule glycosylation 4.11% (3/73) 2.63 0.012632 0.038816
GO:0043226 organelle 73.97% (54/73) 0.28 0.012539 0.038955
GO:0016973 poly(A)+ mRNA export from nucleus 1.37% (1/73) 6.24 0.01313 0.039483
GO:0006513 protein monoubiquitination 1.37% (1/73) 6.24 0.01313 0.039483
GO:0004709 MAP kinase kinase kinase activity 1.37% (1/73) 6.24 0.01313 0.039483
GO:0034399 nuclear periphery 1.37% (1/73) 6.24 0.01313 0.039483
GO:0009266 response to temperature stimulus 9.59% (7/73) 1.47 0.01295 0.039504
GO:0034660 ncRNA metabolic process 5.48% (4/73) 2.14 0.012944 0.039629
GO:0022412 cellular process involved in reproduction in multicellular organism 4.11% (3/73) 2.6 0.013384 0.040104
GO:0016071 mRNA metabolic process 5.48% (4/73) 2.13 0.013456 0.040176
GO:0002376 immune system process 5.48% (4/73) 2.12 0.013716 0.04081
GO:0005737 cytoplasm 21.92% (16/73) 0.84 0.013995 0.041348
GO:0016570 histone modification 5.48% (4/73) 2.11 0.01398 0.041449
GO:0009605 response to external stimulus 15.07% (11/73) 1.08 0.01414 0.041631
GO:0010073 meristem maintenance 2.74% (2/73) 3.46 0.014385 0.042207
GO:0003964 RNA-directed DNA polymerase activity 1.37% (1/73) 5.98 0.015735 0.04538
GO:0051098 regulation of binding 1.37% (1/73) 5.98 0.015735 0.04538
GO:0016208 AMP binding 1.37% (1/73) 5.98 0.015735 0.04538
GO:2000012 regulation of auxin polar transport 1.37% (1/73) 5.98 0.015735 0.04538
GO:0006278 RNA-dependent DNA biosynthetic process 1.37% (1/73) 5.98 0.015735 0.04538
GO:0007010 cytoskeleton organization 5.48% (4/73) 2.05 0.015917 0.045746
GO:0004540 ribonuclease activity 2.74% (2/73) 3.38 0.016006 0.045847
GO:0051052 regulation of DNA metabolic process 2.74% (2/73) 3.34 0.016844 0.047923
GO:0010332 response to gamma radiation 2.74% (2/73) 3.34 0.016844 0.047923
GO:0006952 defense response 10.96% (8/73) 1.27 0.017256 0.04893
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_24 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_80 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_139 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_160 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_163 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_220 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_252 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_262 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_7 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.047 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_70 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_76 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_102 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_143 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_168 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_16 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_22 0.072 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_71 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_79 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_80 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_104 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_134 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_146 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_151 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_158 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_29 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_47 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_121 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_149 0.064 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_203 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_214 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_217 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_252 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_262 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_265 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_274 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_292 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_295 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_302 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_22 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_32 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_75 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_83 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_100 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_111 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_119 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_145 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_149 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_150 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_154 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_158 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_164 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_165 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_179 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_188 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (73) (download table)

InterPro Domains

GO Terms

Family Terms