Coexpression cluster: Cluster_1 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006401 RNA catabolic process 5.67% (8/141) 3.81 0.0 0.000119
GO:0006402 mRNA catabolic process 4.96% (7/141) 3.74 1e-06 0.000178
GO:0000956 nuclear-transcribed mRNA catabolic process 4.96% (7/141) 3.75 1e-06 0.0002
GO:0034655 nucleobase-containing compound catabolic process 5.67% (8/141) 3.56 0.0 0.000225
GO:0044260 cellular macromolecule metabolic process 27.66% (39/141) 1.15 1e-06 0.000246
GO:0010629 negative regulation of gene expression 8.51% (12/141) 2.58 1e-06 0.000317
GO:0006807 nitrogen compound metabolic process 34.04% (48/141) 0.88 7e-06 0.00111
GO:0043170 macromolecule metabolic process 31.21% (44/141) 0.93 1e-05 0.001316
GO:0043412 macromolecule modification 17.02% (24/141) 1.35 2e-05 0.002298
GO:0005634 nucleus 50.35% (71/141) 0.59 2.6e-05 0.002318
GO:0006464 cellular protein modification process 14.89% (21/141) 1.46 2.4e-05 0.002327
GO:0036211 protein modification process 14.89% (21/141) 1.46 2.4e-05 0.002327
GO:0009057 macromolecule catabolic process 9.22% (13/141) 1.97 2.9e-05 0.00238
GO:0090304 nucleic acid metabolic process 16.31% (23/141) 1.29 6e-05 0.004493
GO:0010605 negative regulation of macromolecule metabolic process 8.51% (12/141) 1.94 7.5e-05 0.004925
GO:0044270 cellular nitrogen compound catabolic process 5.67% (8/141) 2.5 9.4e-05 0.004946
GO:0044265 cellular macromolecule catabolic process 7.8% (11/141) 2.06 7.3e-05 0.005077
GO:0019439 aromatic compound catabolic process 5.67% (8/141) 2.5 9.2e-05 0.005078
GO:1901361 organic cyclic compound catabolic process 5.67% (8/141) 2.48 0.000104 0.005199
GO:0044267 cellular protein metabolic process 16.31% (23/141) 1.25 9e-05 0.005274
GO:0009892 negative regulation of metabolic process 8.51% (12/141) 1.87 0.000116 0.005529
GO:0046700 heterocycle catabolic process 5.67% (8/141) 2.51 9e-05 0.005535
GO:0005488 binding 34.75% (49/141) 0.72 0.000122 0.005563
GO:0046349 amino sugar biosynthetic process 1.42% (2/141) 6.62 0.000154 0.005982
GO:0051011 microtubule minus-end binding 1.42% (2/141) 6.62 0.000154 0.005982
GO:0009630 gravitropism 4.26% (6/141) 2.93 0.000143 0.005997
GO:0016441 posttranscriptional gene silencing 4.26% (6/141) 2.93 0.000143 0.005997
GO:0009629 response to gravity 4.26% (6/141) 2.86 0.000188 0.007053
GO:0043227 membrane-bounded organelle 74.47% (105/141) 0.31 0.000235 0.007472
GO:0009606 tropism 4.26% (6/141) 2.83 0.000215 0.007512
GO:0043231 intracellular membrane-bounded organelle 74.47% (105/141) 0.31 0.00023 0.007558
GO:0005829 cytosol 13.48% (19/141) 1.32 0.000211 0.007648
GO:0044237 cellular metabolic process 39.01% (55/141) 0.62 0.00023 0.007792
GO:0010587 miRNA catabolic process 1.42% (2/141) 6.29 0.000256 0.007891
GO:0010586 miRNA metabolic process 1.42% (2/141) 6.03 0.000382 0.010028
GO:0034661 ncRNA catabolic process 1.42% (2/141) 6.03 0.000382 0.010028
GO:0006486 protein glycosylation 4.26% (6/141) 2.68 0.000362 0.010276
GO:0043413 macromolecule glycosylation 4.26% (6/141) 2.68 0.000362 0.010276
GO:0070085 glycosylation 4.26% (6/141) 2.68 0.000362 0.010276
GO:0046483 heterocycle metabolic process 19.86% (28/141) 0.97 0.000376 0.010398
GO:0043226 organelle 74.47% (105/141) 0.29 0.000421 0.010515
GO:0043229 intracellular organelle 74.47% (105/141) 0.29 0.000413 0.010573
GO:0016567 protein ubiquitination 4.26% (6/141) 2.62 0.000467 0.011407
GO:0044238 primary metabolic process 35.46% (50/141) 0.63 0.000493 0.011761
GO:0019538 protein metabolic process 18.44% (26/141) 0.97 0.000649 0.015133
GO:0071704 organic substance metabolic process 39.01% (55/141) 0.56 0.000684 0.015613
GO:0016070 RNA metabolic process 12.06% (17/141) 1.27 0.000702 0.015689
GO:0032446 protein modification by small protein conjugation 4.26% (6/141) 2.48 0.000766 0.016758
GO:0070647 protein modification by small protein conjugation or removal 4.96% (7/141) 2.21 0.000836 0.01791
GO:0048586 regulation of long-day photoperiodism, flowering 1.42% (2/141) 5.45 0.000908 0.019061
GO:0034641 cellular nitrogen compound metabolic process 19.86% (28/141) 0.89 0.000946 0.019096
GO:0048519 negative regulation of biological process 10.64% (15/141) 1.33 0.000941 0.01937
GO:0009056 catabolic process 13.48% (19/141) 1.14 0.001006 0.019553
GO:1901575 organic substance catabolic process 12.06% (17/141) 1.22 0.000999 0.019783
GO:0006139 nucleobase-containing compound metabolic process 17.02% (24/141) 0.97 0.001059 0.020221
GO:0048573 photoperiodism, flowering 3.55% (5/141) 2.68 0.001147 0.020769
GO:0010608 posttranscriptional regulation of gene expression 4.26% (6/141) 2.37 0.001117 0.020952
GO:0044248 cellular catabolic process 11.35% (16/141) 1.25 0.001137 0.020952
GO:0009648 photoperiodism 3.55% (5/141) 2.62 0.001399 0.024894
GO:0008152 metabolic process 40.43% (57/141) 0.5 0.001612 0.028203
GO:0005515 protein binding 14.89% (21/141) 1.0 0.001796 0.030907
GO:0000419 RNA polymerase V complex 1.42% (2/141) 4.92 0.00194 0.031836
GO:0006040 amino sugar metabolic process 1.42% (2/141) 4.92 0.00194 0.031836
GO:0006725 cellular aromatic compound metabolic process 19.86% (28/141) 0.82 0.001888 0.031976
GO:0016071 mRNA metabolic process 4.96% (7/141) 1.98 0.002076 0.033533
GO:0009615 response to virus 3.55% (5/141) 2.44 0.002398 0.037585
GO:0015631 tubulin binding 2.13% (3/141) 3.5 0.002388 0.037998
GO:2000028 regulation of photoperiodism, flowering 1.42% (2/141) 4.71 0.002595 0.040066
GO:0030276 clathrin binding 1.42% (2/141) 4.62 0.002956 0.044976
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_28 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_38 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_40 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_74 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_85 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_86 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_99 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_101 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_109 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_114 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_115 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_140 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_158 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_160 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_179 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_186 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_189 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_193 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_194 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_199 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_221 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_232 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_246 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_252 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_29 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_66 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_83 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_29 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_33 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_55 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_78 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_79 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_88 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_104 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_125 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_144 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_148 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_1 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_29 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_47 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_48 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_64 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_114 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_141 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_148 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_203 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_214 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_217 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_220 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_237 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_244 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_245 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_262 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_274 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_275 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_282 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_290 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_1 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_44 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_56 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_67 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_94 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_145 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_158 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_179 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (141) (download table)

InterPro Domains

GO Terms

Family Terms