Coexpression cluster: Cluster_87 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010476 gibberellin mediated signaling pathway 7.79% (6/77) 4.81 0.0 2.6e-05
GO:0048629 trichome patterning 3.9% (3/77) 7.75 0.0 4.7e-05
GO:0009740 gibberellic acid mediated signaling pathway 7.79% (6/77) 4.83 0.0 4.9e-05
GO:0045168 cell-cell signaling involved in cell fate commitment 3.9% (3/77) 7.27 1e-06 7e-05
GO:0003700 DNA-binding transcription factor activity 23.38% (18/77) 1.95 1e-06 7.6e-05
GO:0140110 transcription regulator activity 23.38% (18/77) 1.93 1e-06 7.8e-05
GO:0009965 leaf morphogenesis 9.09% (7/77) 3.74 1e-06 8.2e-05
GO:0048869 cellular developmental process 15.58% (12/77) 2.62 1e-06 9.2e-05
GO:0030154 cell differentiation 12.99% (10/77) 2.78 2e-06 0.000146
GO:0009653 anatomical structure morphogenesis 18.18% (14/77) 2.16 2e-06 0.000149
GO:1905392 plant organ morphogenesis 10.39% (8/77) 3.23 2e-06 0.000155
GO:0032502 developmental process 32.47% (25/77) 1.37 4e-06 0.000246
GO:0030855 epithelial cell differentiation 3.9% (3/77) 6.07 1.1e-05 0.000551
GO:0009913 epidermal cell differentiation 3.9% (3/77) 6.07 1.1e-05 0.000551
GO:0001708 cell fate specification 5.19% (4/77) 4.68 1.8e-05 0.00083
GO:0031326 regulation of cellular biosynthetic process 20.78% (16/77) 1.53 9.8e-05 0.00353
GO:0051252 regulation of RNA metabolic process 19.48% (15/77) 1.59 0.000108 0.003683
GO:2001141 regulation of RNA biosynthetic process 19.48% (15/77) 1.6 9.8e-05 0.003726
GO:1903506 regulation of nucleic acid-templated transcription 19.48% (15/77) 1.6 9.8e-05 0.00392
GO:0006355 regulation of transcription, DNA-templated 19.48% (15/77) 1.6 9.8e-05 0.00392
GO:0051171 regulation of nitrogen compound metabolic process 20.78% (16/77) 1.5 0.000129 0.00417
GO:0019219 regulation of nucleobase-containing compound metabolic process 19.48% (15/77) 1.54 0.000152 0.004707
GO:0009889 regulation of biosynthetic process 20.78% (16/77) 1.45 0.000182 0.005383
GO:0010556 regulation of macromolecule biosynthetic process 19.48% (15/77) 1.47 0.000261 0.007112
GO:2000112 regulation of cellular macromolecule biosynthetic process 19.48% (15/77) 1.47 0.00026 0.007367
GO:0010468 regulation of gene expression 20.78% (16/77) 1.39 0.000296 0.007756
GO:0050794 regulation of cellular process 29.87% (23/77) 1.07 0.000324 0.008164
GO:0099402 plant organ development 10.39% (8/77) 2.2 0.000355 0.008642
GO:0031323 regulation of cellular metabolic process 20.78% (16/77) 1.32 0.000536 0.011773
GO:0032501 multicellular organismal process 18.18% (14/77) 1.45 0.000507 0.011911
GO:0050789 regulation of biological process 32.47% (25/77) 0.96 0.000534 0.012132
GO:0090558 plant epidermis development 2.6% (2/77) 5.49 0.000895 0.016936
GO:0010374 stomatal complex development 2.6% (2/77) 5.49 0.000895 0.016936
GO:0010187 negative regulation of seed germination 2.6% (2/77) 5.49 0.000895 0.016936
GO:0060255 regulation of macromolecule metabolic process 20.78% (16/77) 1.26 0.000812 0.017283
GO:0080090 regulation of primary metabolic process 19.48% (15/77) 1.31 0.000864 0.017834
GO:0022611 dormancy process 5.19% (4/77) 3.18 0.001004 0.017989
GO:0010162 seed dormancy process 5.19% (4/77) 3.19 0.00098 0.018045
GO:0065007 biological regulation 33.77% (26/77) 0.86 0.001148 0.020041
GO:0048856 anatomical structure development 16.88% (13/77) 1.36 0.001417 0.024128
GO:0048581 negative regulation of post-embryonic development 3.9% (3/77) 3.68 0.001682 0.027932
GO:0003006 developmental process involved in reproduction 16.88% (13/77) 1.32 0.001816 0.029449
GO:0051241 negative regulation of multicellular organismal process 3.9% (3/77) 3.58 0.002049 0.032447
GO:0007389 pattern specification process 6.49% (5/77) 2.41 0.002582 0.039957
GO:0070509 calcium ion import 1.3% (1/77) 8.49 0.002784 0.040343
GO:0009946 proximal/distal axis specification 1.3% (1/77) 8.49 0.002784 0.040343
GO:0090470 shoot organ boundary specification 1.3% (1/77) 8.49 0.002784 0.040343
GO:0051093 negative regulation of developmental process 3.9% (3/77) 3.36 0.003173 0.043218
GO:0007267 cell-cell signaling 3.9% (3/77) 3.36 0.003173 0.043218
GO:0023052 signaling 3.9% (3/77) 3.35 0.003259 0.043518
GO:0009755 hormone-mediated signaling pathway 9.09% (7/77) 1.85 0.00333 0.043612
GO:0019222 regulation of metabolic process 20.78% (16/77) 1.07 0.003098 0.043952
GO:0015995 chlorophyll biosynthetic process 3.9% (3/77) 3.29 0.003617 0.046476
GO:0048609 multicellular organismal reproductive process 5.19% (4/77) 2.66 0.003805 0.047988
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_3 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_7 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_12 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_18 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_20 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_23 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_26 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_28 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_31 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_36 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_42 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_47 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_48 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_51 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_54 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_67 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_78 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_85 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_88 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_89 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_92 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_100 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_113 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_115 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_116 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_120 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_129 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_143 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_145 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_148 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_150 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_168 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_180 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_188 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_190 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_196 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_198 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_205 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_211 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_214 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_219 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_229 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_238 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_255 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_332 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_29 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_42 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_62 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_65 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_120 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_148 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_161 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_4 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_86 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_130 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_138 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_168 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_169 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_172 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_201 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_209 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_218 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_230 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_249 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_255 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_411 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (77) (download table)

InterPro Domains

GO Terms

Family Terms