Coexpression cluster: Cluster_110 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006479 protein methylation 30.22% (42/139) 4.86 0.0 0.0
GO:0051567 histone H3-K9 methylation 29.5% (41/139) 5.51 0.0 0.0
GO:0034968 histone lysine methylation 30.22% (42/139) 5.18 0.0 0.0
GO:0007017 microtubule-based process 30.22% (42/139) 5.01 0.0 0.0
GO:0022402 cell cycle process 39.57% (55/139) 4.33 0.0 0.0
GO:0018022 peptidyl-lysine methylation 30.22% (42/139) 5.17 0.0 0.0
GO:0016571 histone methylation 30.22% (42/139) 4.87 0.0 0.0
GO:0016570 histone modification 33.81% (47/139) 4.74 0.0 0.0
GO:0000911 cytokinesis by cell plate formation 33.09% (46/139) 5.61 0.0 0.0
GO:0000910 cytokinesis 33.09% (46/139) 5.58 0.0 0.0
GO:0008283 cell population proliferation 31.65% (44/139) 5.76 0.0 0.0
GO:0006275 regulation of DNA replication 25.9% (36/139) 5.74 0.0 0.0
GO:0008213 protein alkylation 30.22% (42/139) 4.86 0.0 0.0
GO:0000226 microtubule cytoskeleton organization 28.78% (40/139) 5.05 0.0 0.0
GO:0061647 histone H3-K9 modification 29.5% (41/139) 5.51 0.0 0.0
GO:0006306 DNA methylation 25.18% (35/139) 5.35 0.0 0.0
GO:0006305 DNA alkylation 25.18% (35/139) 5.35 0.0 0.0
GO:0044728 DNA methylation or demethylation 25.18% (35/139) 5.33 0.0 0.0
GO:0018205 peptidyl-lysine modification 30.22% (42/139) 4.62 0.0 0.0
GO:0006304 DNA modification 25.18% (35/139) 5.32 0.0 0.0
GO:0006260 DNA replication 27.34% (38/139) 4.86 0.0 0.0
GO:0051726 regulation of cell cycle 28.06% (39/139) 4.74 0.0 0.0
GO:0007010 cytoskeleton organization 29.5% (41/139) 4.48 0.0 0.0
GO:0018193 peptidyl-amino acid modification 30.22% (42/139) 4.38 0.0 0.0
GO:0043414 macromolecule methylation 31.65% (44/139) 4.12 0.0 0.0
GO:0032259 methylation 31.65% (44/139) 4.12 0.0 0.0
GO:1901987 regulation of cell cycle phase transition 17.99% (25/139) 6.09 0.0 0.0
GO:0006270 DNA replication initiation 17.27% (24/139) 6.2 0.0 0.0
GO:1901990 regulation of mitotic cell cycle phase transition 17.27% (24/139) 6.09 0.0 0.0
GO:0006259 DNA metabolic process 30.22% (42/139) 3.91 0.0 0.0
GO:0007346 regulation of mitotic cell cycle 17.99% (25/139) 5.61 0.0 0.0
GO:0010389 regulation of G2/M transition of mitotic cell cycle 15.83% (22/139) 6.1 0.0 0.0
GO:1902749 regulation of cell cycle G2/M phase transition 15.83% (22/139) 6.1 0.0 0.0
GO:0010564 regulation of cell cycle process 19.42% (27/139) 5.23 0.0 0.0
GO:0006996 organelle organization 38.13% (53/139) 3.04 0.0 0.0
GO:0048449 floral organ formation 16.55% (23/139) 5.03 0.0 0.0
GO:0006464 cellular protein modification process 35.25% (49/139) 2.7 0.0 0.0
GO:0036211 protein modification process 35.25% (49/139) 2.7 0.0 0.0
GO:0016043 cellular component organization 42.45% (59/139) 2.29 0.0 0.0
GO:1905393 plant organ formation 17.27% (24/139) 4.62 0.0 0.0
GO:0016458 obsolete gene silencing 12.23% (17/139) 5.87 0.0 0.0
GO:0048646 anatomical structure formation involved in morphogenesis 19.42% (27/139) 4.14 0.0 0.0
GO:0009909 regulation of flower development 20.14% (28/139) 3.97 0.0 0.0
GO:0043412 macromolecule modification 36.69% (51/139) 2.46 0.0 0.0
GO:0048831 regulation of shoot system development 20.14% (28/139) 3.9 0.0 0.0
GO:0071840 cellular component organization or biogenesis 42.45% (59/139) 2.17 0.0 0.0
GO:0006261 DNA-dependent DNA replication 16.55% (23/139) 4.48 0.0 0.0
GO:0048451 petal formation 12.23% (17/139) 5.55 0.0 0.0
GO:0048453 sepal formation 12.23% (17/139) 5.55 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 47.48% (66/139) 1.93 0.0 0.0
GO:2000241 regulation of reproductive process 20.14% (28/139) 3.7 0.0 0.0
GO:0044267 cellular protein metabolic process 35.25% (49/139) 2.36 0.0 0.0
GO:0048580 regulation of post-embryonic development 20.14% (28/139) 3.55 0.0 0.0
GO:2000026 regulation of multicellular organismal development 20.14% (28/139) 3.53 0.0 0.0
GO:0016572 histone phosphorylation 10.79% (15/139) 5.59 0.0 0.0
GO:0051239 regulation of multicellular organismal process 20.14% (28/139) 3.42 0.0 0.0
GO:0031048 heterochromatin assembly by small RNA 12.23% (17/139) 4.88 0.0 0.0
GO:0006346 DNA methylation-dependent heterochromatin assembly 12.23% (17/139) 4.75 0.0 0.0
GO:0090304 nucleic acid metabolic process 32.37% (45/139) 2.28 0.0 0.0
GO:0031047 gene silencing by RNA 12.95% (18/139) 4.48 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 27.34% (38/139) 2.56 0.0 0.0
GO:0050793 regulation of developmental process 23.02% (32/139) 2.87 0.0 0.0
GO:0019538 protein metabolic process 36.69% (51/139) 1.96 0.0 0.0
GO:0009059 macromolecule biosynthetic process 28.06% (39/139) 2.41 0.0 0.0
GO:0043170 macromolecule metabolic process 48.2% (67/139) 1.55 0.0 0.0
GO:0010629 negative regulation of gene expression 16.55% (23/139) 3.54 0.0 0.0
GO:0003777 microtubule motor activity 9.35% (13/139) 5.29 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 34.53% (48/139) 1.99 0.0 0.0
GO:0031507 heterochromatin assembly 12.23% (17/139) 4.29 0.0 0.0
GO:0070828 heterochromatin organization 12.23% (17/139) 4.28 0.0 0.0
GO:0045814 negative regulation of gene expression, epigenetic 12.23% (17/139) 4.26 0.0 0.0
GO:0006325 chromatin organization 13.67% (19/139) 3.86 0.0 0.0
GO:0040029 regulation of gene expression, epigenetic 12.23% (17/139) 4.07 0.0 0.0
GO:0003774 cytoskeletal motor activity 9.35% (13/139) 4.94 0.0 0.0
GO:0051225 spindle assembly 7.91% (11/139) 5.57 0.0 0.0
GO:0060255 regulation of macromolecule metabolic process 33.09% (46/139) 1.93 0.0 0.0
GO:0003677 DNA binding 25.18% (35/139) 2.37 0.0 0.0
GO:0010605 negative regulation of macromolecule metabolic process 17.99% (25/139) 3.02 0.0 0.0
GO:0007051 spindle organization 7.91% (11/139) 5.51 0.0 0.0
GO:0140694 non-membrane-bounded organelle assembly 7.91% (11/139) 5.51 0.0 0.0
GO:0070925 organelle assembly 7.91% (11/139) 5.48 0.0 0.0
GO:0009892 negative regulation of metabolic process 17.99% (25/139) 2.95 0.0 0.0
GO:0046483 heterocycle metabolic process 34.53% (48/139) 1.77 0.0 0.0
GO:2000112 regulation of cellular macromolecule biosynthetic process 28.78% (40/139) 2.04 0.0 0.0
GO:0010556 regulation of macromolecule biosynthetic process 28.78% (40/139) 2.04 0.0 0.0
GO:0031326 regulation of cellular biosynthetic process 28.78% (40/139) 2.0 0.0 0.0
GO:0005634 nucleus 64.75% (90/139) 0.95 0.0 0.0
GO:0019222 regulation of metabolic process 33.09% (46/139) 1.75 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 34.53% (48/139) 1.69 0.0 0.0
GO:0009889 regulation of biosynthetic process 28.78% (40/139) 1.92 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 34.53% (48/139) 1.62 0.0 0.0
GO:0031323 regulation of cellular metabolic process 29.5% (41/139) 1.82 0.0 0.0
GO:0048519 negative regulation of biological process 20.86% (29/139) 2.3 0.0 0.0
GO:0009987 cellular process 66.19% (92/139) 0.86 0.0 0.0
GO:0140657 ATP-dependent activity 12.95% (18/139) 3.22 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 34.53% (48/139) 1.55 0.0 0.0
GO:0050789 regulation of biological process 41.01% (57/139) 1.29 0.0 0.0
GO:1903047 mitotic cell cycle process 5.76% (8/139) 5.43 0.0 0.0
GO:0006807 nitrogen compound metabolic process 43.17% (60/139) 1.23 0.0 0.0
GO:0050794 regulation of cellular process 36.69% (51/139) 1.36 0.0 0.0
GO:0006468 protein phosphorylation 12.95% (18/139) 2.9 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 36.69% (51/139) 1.36 0.0 0.0
GO:0032502 developmental process 33.81% (47/139) 1.43 0.0 0.0
GO:0003676 nucleic acid binding 25.18% (35/139) 1.72 0.0 0.0
GO:0042127 regulation of cell population proliferation 7.19% (10/139) 4.08 0.0 0.0
GO:0065007 biological regulation 41.01% (57/139) 1.14 0.0 0.0
GO:0000724 double-strand break repair via homologous recombination 5.76% (8/139) 4.59 0.0 0.0
GO:0000725 recombinational repair 5.76% (8/139) 4.59 0.0 0.0
GO:0044237 cellular metabolic process 48.92% (68/139) 0.95 0.0 0.0
GO:1901363 heterocyclic compound binding 28.78% (40/139) 1.45 0.0 0.0
GO:0097159 organic cyclic compound binding 28.78% (40/139) 1.44 0.0 0.0
GO:0006302 double-strand break repair 6.47% (9/139) 4.11 0.0 0.0
GO:0071704 organic substance metabolic process 49.64% (69/139) 0.91 0.0 0.0
GO:0044786 cell cycle DNA replication 6.47% (9/139) 4.0 0.0 0.0
GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis 2.88% (4/139) 7.05 0.0 0.0
GO:0000912 assembly of actomyosin apparatus involved in cytokinesis 2.88% (4/139) 7.05 0.0 0.0
GO:0000914 phragmoplast assembly 2.88% (4/139) 7.05 0.0 0.0
GO:0032506 cytokinetic process 2.88% (4/139) 7.05 0.0 0.0
GO:1902410 mitotic cytokinetic process 2.88% (4/139) 7.05 0.0 0.0
GO:0016310 phosphorylation 12.95% (18/139) 2.38 0.0 0.0
GO:0044238 primary metabolic process 44.6% (62/139) 0.96 0.0 0.0
GO:0001708 cell fate specification 5.04% (7/139) 4.64 0.0 0.0
GO:0051276 chromosome organization 7.91% (11/139) 3.27 0.0 0.0
GO:0000280 nuclear division 5.04% (7/139) 4.47 0.0 0.0
GO:0006310 DNA recombination 7.91% (11/139) 3.21 0.0 0.0
GO:0003006 developmental process involved in reproduction 20.86% (29/139) 1.63 0.0 0.0
GO:0010948 negative regulation of cell cycle process 3.6% (5/139) 5.64 0.0 0.0
GO:0022414 reproductive process 23.02% (32/139) 1.51 0.0 0.0
GO:0006281 DNA repair 7.91% (11/139) 3.14 0.0 0.0
GO:0005488 binding 41.01% (57/139) 0.96 0.0 1e-06
GO:0042023 DNA endoreduplication 5.76% (8/139) 3.84 0.0 1e-06
GO:0008152 metabolic process 49.64% (69/139) 0.8 0.0 1e-06
GO:0022607 cellular component assembly 12.23% (17/139) 2.24 0.0 1e-06
GO:0000278 mitotic cell cycle 6.47% (9/139) 3.47 0.0 1e-06
GO:1901988 negative regulation of cell cycle phase transition 2.88% (4/139) 6.18 0.0 1e-06
GO:0000075 cell cycle checkpoint signaling 2.88% (4/139) 6.18 0.0 1e-06
GO:0071103 DNA conformation change 3.6% (5/139) 5.2 0.0 1e-06
GO:0044815 DNA packaging complex 2.88% (4/139) 6.05 0.0 2e-06
GO:0006974 cellular response to DNA damage stimulus 7.91% (11/139) 2.89 0.0 2e-06
GO:0048285 organelle fission 5.04% (7/139) 3.87 1e-06 3e-06
GO:0009957 epidermal cell fate specification 2.88% (4/139) 5.73 1e-06 5e-06
GO:0010583 response to cyclopentenone 5.76% (8/139) 3.43 1e-06 5e-06
GO:0010468 regulation of gene expression 20.86% (29/139) 1.4 1e-06 7e-06
GO:0140097 catalytic activity, acting on DNA 5.04% (7/139) 3.68 1e-06 8e-06
GO:0007049 cell cycle 6.47% (9/139) 3.03 2e-06 1e-05
GO:0099080 supramolecular complex 4.32% (6/139) 4.03 2e-06 1e-05
GO:0008094 ATP-dependent activity, acting on DNA 3.6% (5/139) 4.6 2e-06 1.1e-05
GO:0043228 non-membrane-bounded organelle 10.79% (15/139) 2.11 2e-06 1.2e-05
GO:0043232 intracellular non-membrane-bounded organelle 10.79% (15/139) 2.11 2e-06 1.2e-05
GO:0044249 cellular biosynthetic process 27.34% (38/139) 1.11 3e-06 1.4e-05
GO:0045786 negative regulation of cell cycle 3.6% (5/139) 4.4 4e-06 2.1e-05
GO:0051784 negative regulation of nuclear division 2.16% (3/139) 6.41 4e-06 2.3e-05
GO:0007349 cellularization 2.16% (3/139) 6.41 4e-06 2.3e-05
GO:0009524 phragmoplast 3.6% (5/139) 4.34 5e-06 2.5e-05
GO:0007093 mitotic cell cycle checkpoint signaling 2.16% (3/139) 6.22 7e-06 3.6e-05
GO:1901576 organic substance biosynthetic process 28.06% (39/139) 0.99 1.3e-05 6.9e-05
GO:0045930 negative regulation of mitotic cell cycle 2.16% (3/139) 5.9 1.5e-05 7.5e-05
GO:0005730 nucleolus 6.47% (9/139) 2.64 1.6e-05 8.2e-05
GO:0000796 condensin complex 1.44% (2/139) 7.64 2.5e-05 0.000127
GO:0006796 phosphate-containing compound metabolic process 15.83% (22/139) 1.4 2.7e-05 0.000133
GO:0000228 nuclear chromosome 2.16% (3/139) 5.64 2.6e-05 0.000133
GO:0009058 biosynthetic process 28.06% (39/139) 0.95 2.7e-05 0.000135
GO:0006793 phosphorus metabolic process 15.83% (22/139) 1.39 3.2e-05 0.00016
GO:0032993 protein-DNA complex 2.16% (3/139) 5.31 5.4e-05 0.000264
GO:0051783 regulation of nuclear division 2.16% (3/139) 5.31 5.4e-05 0.000264
GO:0005694 chromosome 2.88% (4/139) 4.21 6.5e-05 0.000314
GO:0000776 kinetochore 1.44% (2/139) 7.05 7.5e-05 0.000358
GO:0030261 chromosome condensation 1.44% (2/139) 7.05 7.5e-05 0.000358
GO:0006323 DNA packaging 1.44% (2/139) 7.05 7.5e-05 0.000358
GO:0005874 microtubule 2.88% (4/139) 4.08 9.2e-05 0.000437
GO:0010639 negative regulation of organelle organization 2.16% (3/139) 4.97 0.000114 0.000532
GO:0051129 negative regulation of cellular component organization 2.16% (3/139) 4.97 0.000114 0.000532
GO:0033048 negative regulation of mitotic sister chromatid segregation 1.44% (2/139) 6.64 0.00015 0.000618
GO:0033045 regulation of sister chromatid segregation 1.44% (2/139) 6.64 0.00015 0.000618
GO:0031577 spindle checkpoint signaling 1.44% (2/139) 6.64 0.00015 0.000618
GO:1905819 negative regulation of chromosome separation 1.44% (2/139) 6.64 0.00015 0.000618
GO:0045841 negative regulation of mitotic metaphase/anaphase transition 1.44% (2/139) 6.64 0.00015 0.000618
GO:0007094 mitotic spindle assembly checkpoint signaling 1.44% (2/139) 6.64 0.00015 0.000618
GO:0030071 regulation of mitotic metaphase/anaphase transition 1.44% (2/139) 6.64 0.00015 0.000618
GO:0031570 DNA integrity checkpoint signaling 1.44% (2/139) 6.64 0.00015 0.000618
GO:2000816 negative regulation of mitotic sister chromatid separation 1.44% (2/139) 6.64 0.00015 0.000618
GO:1905818 regulation of chromosome separation 1.44% (2/139) 6.64 0.00015 0.000618
GO:0033046 negative regulation of sister chromatid segregation 1.44% (2/139) 6.64 0.00015 0.000618
GO:0010965 regulation of mitotic sister chromatid separation 1.44% (2/139) 6.64 0.00015 0.000618
GO:0032137 guanine/thymine mispair binding 1.44% (2/139) 6.64 0.00015 0.000618
GO:0000400 four-way junction DNA binding 1.44% (2/139) 6.64 0.00015 0.000618
GO:0032138 single base insertion or deletion binding 1.44% (2/139) 6.64 0.00015 0.000618
GO:0051985 negative regulation of chromosome segregation 1.44% (2/139) 6.64 0.00015 0.000618
GO:0071173 spindle assembly checkpoint signaling 1.44% (2/139) 6.64 0.00015 0.000618
GO:0071174 mitotic spindle checkpoint signaling 1.44% (2/139) 6.64 0.00015 0.000618
GO:0032301 MutSalpha complex 1.44% (2/139) 6.64 0.00015 0.000618
GO:0033047 regulation of mitotic sister chromatid segregation 1.44% (2/139) 6.64 0.00015 0.000618
GO:0051983 regulation of chromosome segregation 1.44% (2/139) 6.64 0.00015 0.000618
GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle 1.44% (2/139) 6.64 0.00015 0.000618
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 1.44% (2/139) 6.64 0.00015 0.000618
GO:0051258 protein polymerization 2.16% (3/139) 4.83 0.000155 0.000636
GO:0048229 gametophyte development 5.04% (7/139) 2.58 0.000183 0.000749
GO:0099513 polymeric cytoskeletal fiber 2.88% (4/139) 3.8 0.000196 0.000791
GO:0099512 supramolecular fiber 2.88% (4/139) 3.8 0.000196 0.000791
GO:0099081 supramolecular polymer 2.88% (4/139) 3.8 0.000196 0.000791
GO:0007000 nucleolus organization 2.16% (3/139) 4.64 0.000233 0.000933
GO:1903046 meiotic cell cycle process 5.04% (7/139) 2.52 0.000237 0.000944
GO:0042575 DNA polymerase complex 1.44% (2/139) 6.31 0.000248 0.000962
GO:0009558 embryo sac cellularization 1.44% (2/139) 6.31 0.000248 0.000962
GO:0032135 DNA insertion or deletion binding 1.44% (2/139) 6.31 0.000248 0.000962
GO:2001251 negative regulation of chromosome organization 1.44% (2/139) 6.31 0.000248 0.000962
GO:0043570 maintenance of DNA repeat elements 1.44% (2/139) 6.31 0.000248 0.000962
GO:0045839 negative regulation of mitotic nuclear division 1.44% (2/139) 6.31 0.000248 0.000962
GO:0043231 intracellular membrane-bounded organelle 74.1% (103/139) 0.3 0.00036 0.001389
GO:0043227 membrane-bounded organelle 74.1% (103/139) 0.3 0.000367 0.001409
GO:1901991 negative regulation of mitotic cell cycle phase transition 1.44% (2/139) 6.05 0.000371 0.001412
GO:0007088 regulation of mitotic nuclear division 1.44% (2/139) 6.05 0.000371 0.001412
GO:0016246 RNA interference 2.88% (4/139) 3.55 0.000388 0.001468
GO:0000018 regulation of DNA recombination 1.44% (2/139) 5.83 0.000518 0.001942
GO:0045910 negative regulation of DNA recombination 1.44% (2/139) 5.83 0.000518 0.001942
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity 2.16% (3/139) 4.22 0.000554 0.002067
GO:0051052 regulation of DNA metabolic process 2.88% (4/139) 3.41 0.000563 0.002093
GO:0014070 response to organic cyclic compound 5.76% (8/139) 2.1 0.000607 0.002244
GO:0043229 intracellular organelle 74.1% (103/139) 0.29 0.000632 0.002326
GO:0043226 organelle 74.1% (103/139) 0.29 0.000643 0.002357
GO:0035194 post-transcriptional gene silencing by RNA 2.88% (4/139) 3.35 0.000654 0.002383
GO:0000217 DNA secondary structure binding 1.44% (2/139) 5.64 0.000689 0.002466
GO:0051053 negative regulation of DNA metabolic process 1.44% (2/139) 5.64 0.000689 0.002466
GO:0000710 meiotic mismatch repair 1.44% (2/139) 5.64 0.000689 0.002466
GO:0005875 microtubule associated complex 1.44% (2/139) 5.64 0.000689 0.002466
GO:0019887 protein kinase regulator activity 2.16% (3/139) 4.01 0.000852 0.003038
GO:0006268 DNA unwinding involved in DNA replication 1.44% (2/139) 5.47 0.000882 0.003133
GO:0019207 kinase regulator activity 2.16% (3/139) 3.9 0.001071 0.003787
GO:0032300 mismatch repair complex 1.44% (2/139) 5.31 0.001099 0.003835
GO:0030983 mismatched DNA binding 1.44% (2/139) 5.31 0.001099 0.003835
GO:0000786 nucleosome 1.44% (2/139) 5.31 0.001099 0.003835
GO:0000793 condensed chromosome 1.44% (2/139) 5.18 0.001339 0.004632
GO:1990391 DNA repair complex 1.44% (2/139) 5.18 0.001339 0.004632
GO:0033043 regulation of organelle organization 3.6% (5/139) 2.55 0.001715 0.005907
GO:0061982 meiosis I cell cycle process 2.88% (4/139) 2.96 0.001774 0.006086
GO:0005524 ATP binding 5.76% (8/139) 1.85 0.001797 0.006136
GO:0032508 DNA duplex unwinding 1.44% (2/139) 4.94 0.001887 0.006416
GO:0097435 supramolecular fiber organization 3.6% (5/139) 2.49 0.002045 0.006898
GO:0003674 molecular_function 83.45% (116/139) 0.2 0.002038 0.006901
GO:0030554 adenyl nucleotide binding 5.76% (8/139) 1.81 0.002122 0.007098
GO:0032559 adenyl ribonucleotide binding 5.76% (8/139) 1.81 0.002122 0.007098
GO:0032392 DNA geometric change 1.44% (2/139) 4.83 0.002194 0.007307
GO:0006298 mismatch repair 1.44% (2/139) 4.73 0.002523 0.008334
GO:0003887 DNA-directed DNA polymerase activity 1.44% (2/139) 4.73 0.002523 0.008334
GO:0140513 nuclear protein-containing complex 3.6% (5/139) 2.4 0.002656 0.008701
GO:0009965 leaf morphogenesis 3.6% (5/139) 2.4 0.002656 0.008701
GO:0140640 catalytic activity, acting on a nucleic acid 5.04% (7/139) 1.89 0.002994 0.009768
GO:0035639 purine ribonucleoside triphosphate binding 6.47% (9/139) 1.58 0.003289 0.01069
GO:0032991 protein-containing complex 10.79% (15/139) 1.14 0.003456 0.011188
GO:0032555 purine ribonucleotide binding 6.47% (9/139) 1.56 0.003746 0.012078
GO:0017076 purine nucleotide binding 6.47% (9/139) 1.55 0.003786 0.012159
GO:0032553 ribonucleotide binding 6.47% (9/139) 1.54 0.003993 0.01277
GO:0009971 anastral spindle assembly involved in male meiosis 0.72% (1/139) 7.64 0.005026 0.013826
GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters 0.72% (1/139) 7.64 0.005026 0.013826
GO:0044774 mitotic DNA integrity checkpoint signaling 0.72% (1/139) 7.64 0.005026 0.013826
GO:0055048 anastral spindle assembly 0.72% (1/139) 7.64 0.005026 0.013826
GO:0005657 replication fork 0.72% (1/139) 7.64 0.005026 0.013826
GO:0005658 alpha DNA polymerase:primase complex 0.72% (1/139) 7.64 0.005026 0.013826
GO:0035402 histone kinase activity (H3-T11 specific) 0.72% (1/139) 7.64 0.005026 0.013826
GO:0045005 DNA-dependent DNA replication maintenance of fidelity 0.72% (1/139) 7.64 0.005026 0.013826
GO:0035822 gene conversion 0.72% (1/139) 7.64 0.005026 0.013826
GO:0045004 DNA replication proofreading 0.72% (1/139) 7.64 0.005026 0.013826
GO:0043625 delta DNA polymerase complex 0.72% (1/139) 7.64 0.005026 0.013826
GO:0043137 DNA replication, removal of RNA primer 0.72% (1/139) 7.64 0.005026 0.013826
GO:0006269 DNA replication, synthesis of RNA primer 0.72% (1/139) 7.64 0.005026 0.013826
GO:0016048 detection of temperature stimulus 0.72% (1/139) 7.64 0.005026 0.013826
GO:0032302 MutSbeta complex 0.72% (1/139) 7.64 0.005026 0.013826
GO:0072354 histone kinase activity (H3-T3 specific) 0.72% (1/139) 7.64 0.005026 0.013826
GO:0033260 nuclear DNA replication 0.72% (1/139) 7.64 0.005026 0.013826
GO:0004170 dUTP diphosphatase activity 0.72% (1/139) 7.64 0.005026 0.013826
GO:0007076 mitotic chromosome condensation 0.72% (1/139) 7.64 0.005026 0.013826
GO:0035407 histone H3-T11 phosphorylation 0.72% (1/139) 7.64 0.005026 0.013826
GO:0000403 Y-form DNA binding 0.72% (1/139) 7.64 0.005026 0.013826
GO:0035184 histone threonine kinase activity 0.72% (1/139) 7.64 0.005026 0.013826
GO:0000406 double-strand/single-strand DNA junction binding 0.72% (1/139) 7.64 0.005026 0.013826
GO:0018210 peptidyl-threonine modification 0.72% (1/139) 7.64 0.005026 0.013826
GO:0006311 meiotic gene conversion 0.72% (1/139) 7.64 0.005026 0.013826
GO:0006279 premeiotic DNA replication 0.72% (1/139) 7.64 0.005026 0.013826
GO:0008296 3'-5'-exodeoxyribonuclease activity 0.72% (1/139) 7.64 0.005026 0.013826
GO:0006287 base-excision repair, gap-filling 0.72% (1/139) 7.64 0.005026 0.013826
GO:0004529 exodeoxyribonuclease activity 0.72% (1/139) 7.64 0.005026 0.013826
GO:0072355 histone H3-T3 phosphorylation 0.72% (1/139) 7.64 0.005026 0.013826
GO:0005872 minus-end kinesin complex 0.72% (1/139) 7.64 0.005026 0.013826
GO:0008569 minus-end-directed microtubule motor activity 0.72% (1/139) 7.64 0.005026 0.013826
GO:0035405 histone-threonine phosphorylation 0.72% (1/139) 7.64 0.005026 0.013826
GO:0006297 nucleotide-excision repair, DNA gap filling 0.72% (1/139) 7.64 0.005026 0.013826
GO:0007053 spindle assembly involved in male meiosis 0.72% (1/139) 7.64 0.005026 0.013826
GO:0018107 peptidyl-threonine phosphorylation 0.72% (1/139) 7.64 0.005026 0.013826
GO:0097367 carbohydrate derivative binding 6.47% (9/139) 1.52 0.004431 0.014118
GO:0003684 damaged DNA binding 1.44% (2/139) 4.31 0.004491 0.014251
GO:0035825 homologous recombination 2.88% (4/139) 2.53 0.005258 0.014414
GO:0009553 embryo sac development 2.16% (3/139) 3.16 0.004707 0.014877
GO:0010103 stomatal complex morphogenesis 2.88% (4/139) 2.51 0.00553 0.015058
GO:0090626 plant epidermis morphogenesis 2.88% (4/139) 2.51 0.00553 0.015058
GO:0003713 transcription coactivator activity 1.44% (2/139) 4.24 0.004947 0.015516
GO:0034061 DNA polymerase activity 1.44% (2/139) 4.24 0.004947 0.015516
GO:0010608 posttranscriptional regulation of gene expression 3.6% (5/139) 2.13 0.005893 0.015992
GO:0043168 anion binding 6.47% (9/139) 1.42 0.006701 0.018123
GO:0090329 regulation of DNA-dependent DNA replication 1.44% (2/139) 3.99 0.006976 0.018804
GO:0110165 cellular anatomical entity 92.09% (128/139) 0.12 0.007314 0.01965
GO:0005515 protein binding 13.67% (19/139) 0.88 0.00744 0.019922
GO:0016441 posttranscriptional gene silencing 2.88% (4/139) 2.37 0.007704 0.020494
GO:0007129 homologous chromosome pairing at meiosis 2.16% (3/139) 2.9 0.0077 0.020549
GO:0033554 cellular response to stress 8.63% (12/139) 1.15 0.008194 0.021725
GO:0004674 protein serine/threonine kinase activity 4.32% (6/139) 1.78 0.008445 0.022316
GO:0070192 chromosome organization involved in meiotic cell cycle 2.16% (3/139) 2.85 0.008517 0.022435
GO:0045787 positive regulation of cell cycle 1.44% (2/139) 3.83 0.008703 0.022849
GO:0006084 acetyl-CoA metabolic process 2.16% (3/139) 2.81 0.00909 0.023787
GO:0006997 nucleus organization 2.16% (3/139) 2.8 0.009384 0.024478
GO:0030337 DNA polymerase processivity factor activity 0.72% (1/139) 6.64 0.010027 0.02464
GO:0090306 meiotic spindle assembly 0.72% (1/139) 6.64 0.010027 0.02464
GO:0010520 regulation of reciprocal meiotic recombination 0.72% (1/139) 6.64 0.010027 0.02464
GO:0000404 heteroduplex DNA loop binding 0.72% (1/139) 6.64 0.010027 0.02464
GO:0005971 ribonucleoside-diphosphate reductase complex 0.72% (1/139) 6.64 0.010027 0.02464
GO:0045835 negative regulation of meiotic nuclear division 0.72% (1/139) 6.64 0.010027 0.02464
GO:0045128 negative regulation of reciprocal meiotic recombination 0.72% (1/139) 6.64 0.010027 0.02464
GO:0010342 endosperm cellularization 0.72% (1/139) 6.64 0.010027 0.02464
GO:0005871 kinesin complex 0.72% (1/139) 6.64 0.010027 0.02464
GO:0008574 plus-end-directed microtubule motor activity 0.72% (1/139) 6.64 0.010027 0.02464
GO:0000819 sister chromatid segregation 0.72% (1/139) 6.64 0.010027 0.02464
GO:0051447 negative regulation of meiotic cell cycle 0.72% (1/139) 6.64 0.010027 0.02464
GO:0047429 nucleoside-triphosphate diphosphatase activity 0.72% (1/139) 6.64 0.010027 0.02464
GO:0006271 DNA strand elongation involved in DNA replication 0.72% (1/139) 6.64 0.010027 0.02464
GO:0048314 embryo sac morphogenesis 0.72% (1/139) 6.64 0.010027 0.02464
GO:0000076 DNA replication checkpoint signaling 0.72% (1/139) 6.64 0.010027 0.02464
GO:0022616 DNA strand elongation 0.72% (1/139) 6.64 0.010027 0.02464
GO:0005640 nuclear outer membrane 0.72% (1/139) 6.64 0.010027 0.02464
GO:0035383 thioester metabolic process 2.16% (3/139) 2.75 0.010301 0.025159
GO:0006637 acyl-CoA metabolic process 2.16% (3/139) 2.75 0.010301 0.025159
GO:0000166 nucleotide binding 7.19% (10/139) 1.24 0.010396 0.025238
GO:1901265 nucleoside phosphate binding 7.19% (10/139) 1.24 0.010396 0.025238
GO:0003712 transcription coregulator activity 1.44% (2/139) 3.73 0.00995 0.025871
GO:0016444 somatic cell DNA recombination 1.44% (2/139) 3.64 0.011272 0.0272
GO:0006338 chromatin remodeling 1.44% (2/139) 3.64 0.011272 0.0272
GO:0005575 cellular_component 94.96% (132/139) 0.09 0.011336 0.027275
GO:0033875 ribonucleoside bisphosphate metabolic process 2.16% (3/139) 2.67 0.01194 0.028473
GO:0034032 purine nucleoside bisphosphate metabolic process 2.16% (3/139) 2.67 0.01194 0.028473
GO:0033865 nucleoside bisphosphate metabolic process 2.16% (3/139) 2.67 0.01194 0.028473
GO:0051128 regulation of cellular component organization 3.6% (5/139) 1.87 0.012457 0.029617
GO:0045010 actin nucleation 2.16% (3/139) 2.56 0.014474 0.034312
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 0.72% (1/139) 6.05 0.015003 0.034452
GO:0000212 meiotic spindle organization 0.72% (1/139) 6.05 0.015003 0.034452
GO:0061731 ribonucleoside-diphosphate reductase activity 0.72% (1/139) 6.05 0.015003 0.034452
GO:0019692 deoxyribose phosphate metabolic process 0.72% (1/139) 6.05 0.015003 0.034452
GO:0009202 deoxyribonucleoside triphosphate biosynthetic process 0.72% (1/139) 6.05 0.015003 0.034452
GO:0009200 deoxyribonucleoside triphosphate metabolic process 0.72% (1/139) 6.05 0.015003 0.034452
GO:0009394 2'-deoxyribonucleotide metabolic process 0.72% (1/139) 6.05 0.015003 0.034452
GO:0009262 deoxyribonucleotide metabolic process 0.72% (1/139) 6.05 0.015003 0.034452
GO:0080175 phragmoplast microtubule organization 0.72% (1/139) 6.05 0.015003 0.034452
GO:0010434 bract formation 0.72% (1/139) 6.05 0.015003 0.034452
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor 0.72% (1/139) 6.05 0.015003 0.034452
GO:0030234 enzyme regulator activity 2.88% (4/139) 2.0 0.018256 0.041801
GO:0010267 production of ta-siRNAs involved in RNA interference 2.16% (3/139) 2.43 0.018582 0.042309
GO:0048523 negative regulation of cellular process 5.04% (7/139) 1.38 0.018578 0.04242
GO:0061695 transferase complex, transferring phosphorus-containing groups 1.44% (2/139) 3.24 0.018938 0.042997
GO:0051716 cellular response to stimulus 8.63% (12/139) 0.98 0.019589 0.04435
GO:1905392 plant organ morphogenesis 3.6% (5/139) 1.7 0.019681 0.044434
GO:0035173 histone kinase activity 0.72% (1/139) 5.64 0.019955 0.044553
GO:0031261 DNA replication preinitiation complex 0.72% (1/139) 5.64 0.019955 0.044553
GO:0000731 DNA synthesis involved in DNA repair 0.72% (1/139) 5.64 0.019955 0.044553
GO:0008017 microtubule binding 1.44% (2/139) 3.21 0.019797 0.044571
GO:0098772 molecular function regulator 2.88% (4/139) 1.94 0.021085 0.046946
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_31 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_58 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_101 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_115 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_152 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_164 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_214 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_216 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_223 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_240 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_265 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_266 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_268 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_6 0.061 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_44 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_52 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_59 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_92 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_105 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_137 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_147 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_5 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_6 0.149 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_20 0.105 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_40 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_54 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_107 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_130 0.062 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_16 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_17 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_52 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_55 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_130 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_134 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_146 0.121 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_152 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_164 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_168 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_169 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_186 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_219 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_224 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_246 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_259 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_273 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_285 0.044 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_301 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_9 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_22 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_52 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_77 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_99 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_139 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_140 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (139) (download table)

InterPro Domains

GO Terms

Family Terms