Coexpression cluster: Cluster_58 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051603 proteolysis involved in cellular protein catabolic process 30.36% (17/56) 7.54 0.0 0.0
GO:0005839 proteasome core complex 21.43% (12/56) 8.19 0.0 0.0
GO:0004298 threonine-type endopeptidase activity 21.43% (12/56) 8.19 0.0 0.0
GO:0070003 threonine-type peptidase activity 21.43% (12/56) 8.19 0.0 0.0
GO:0006508 proteolysis 32.14% (18/56) 5.05 0.0 0.0
GO:0004175 endopeptidase activity 26.79% (15/56) 5.66 0.0 0.0
GO:0008233 peptidase activity 26.79% (15/56) 4.75 0.0 0.0
GO:0032991 protein-containing complex 32.14% (18/56) 4.06 0.0 0.0
GO:0016787 hydrolase activity 26.79% (15/56) 2.91 0.0 0.0
GO:0043632 modification-dependent macromolecule catabolic process 8.93% (5/56) 6.63 0.0 0.0
GO:0019941 modification-dependent protein catabolic process 8.93% (5/56) 6.63 0.0 0.0
GO:0006511 ubiquitin-dependent protein catabolic process 8.93% (5/56) 6.63 0.0 0.0
GO:0019538 protein metabolic process 32.14% (18/56) 2.49 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 33.93% (19/56) 2.32 0.0 0.0
GO:0140096 catalytic activity, acting on a protein 28.57% (16/56) 2.54 0.0 0.0
GO:0044265 cellular macromolecule catabolic process 8.93% (5/56) 6.17 0.0 0.0
GO:0009057 macromolecule catabolic process 8.93% (5/56) 5.93 0.0 0.0
GO:0005575 cellular_component 32.14% (18/56) 2.2 0.0 0.0
GO:0019773 proteasome core complex, alpha-subunit complex 5.36% (3/56) 8.31 0.0 0.0
GO:0043170 macromolecule metabolic process 32.14% (18/56) 2.08 0.0 1e-06
GO:0044248 cellular catabolic process 8.93% (5/56) 5.31 0.0 1e-06
GO:0006807 nitrogen compound metabolic process 33.93% (19/56) 1.9 0.0 2e-06
GO:1901575 organic substance catabolic process 8.93% (5/56) 4.7 1e-06 9e-06
GO:0009056 catabolic process 8.93% (5/56) 4.63 2e-06 1.1e-05
GO:0071704 organic substance metabolic process 33.93% (19/56) 1.69 2e-06 1.3e-05
GO:0003674 molecular_function 57.14% (32/56) 1.06 3e-06 1.5e-05
GO:0044238 primary metabolic process 32.14% (18/56) 1.69 4e-06 2.4e-05
GO:0008150 biological_process 41.07% (23/56) 1.36 7e-06 3.5e-05
GO:0008152 metabolic process 33.93% (19/56) 1.57 8e-06 3.9e-05
GO:0003824 catalytic activity 32.14% (18/56) 1.14 0.000691 0.003362
GO:0000502 proteasome complex 1.79% (1/56) 8.31 0.003157 0.012128
GO:0009894 regulation of catabolic process 1.79% (1/56) 8.31 0.003157 0.012128
GO:0042176 regulation of protein catabolic process 1.79% (1/56) 8.31 0.003157 0.012128
GO:0043461 proton-transporting ATP synthase complex assembly 1.79% (1/56) 8.31 0.003157 0.012128
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 1.79% (1/56) 8.31 0.003157 0.012128
GO:0010498 proteasomal protein catabolic process 1.79% (1/56) 8.31 0.003157 0.012128
GO:0004357 glutamate-cysteine ligase activity 1.79% (1/56) 8.31 0.003157 0.012128
GO:0140535 intracellular protein-containing complex 3.57% (2/56) 4.72 0.002583 0.012166
GO:0003697 single-stranded DNA binding 1.79% (1/56) 7.31 0.006303 0.020451
GO:0061630 ubiquitin protein ligase activity 1.79% (1/56) 7.31 0.006303 0.020451
GO:0034450 ubiquitin-ubiquitin ligase activity 1.79% (1/56) 7.31 0.006303 0.020451
GO:0061659 ubiquitin-like protein ligase activity 1.79% (1/56) 7.31 0.006303 0.020451
GO:0030163 protein catabolic process 1.79% (1/56) 7.31 0.006303 0.020451
GO:0051171 regulation of nitrogen compound metabolic process 5.36% (3/56) 3.03 0.005869 0.021422
GO:0080090 regulation of primary metabolic process 5.36% (3/56) 3.03 0.005869 0.021422
GO:0060255 regulation of macromolecule metabolic process 5.36% (3/56) 2.95 0.0069 0.021899
GO:0019222 regulation of metabolic process 5.36% (3/56) 2.94 0.007055 0.021916
GO:0070071 proton-transporting two-sector ATPase complex assembly 1.79% (1/56) 6.72 0.00944 0.028714
GO:0070647 protein modification by small protein conjugation or removal 3.57% (2/56) 3.75 0.009659 0.02878
GO:0006952 defense response 1.79% (1/56) 6.31 0.012568 0.035978
GO:0000151 ubiquitin ligase complex 1.79% (1/56) 6.31 0.012568 0.035978
GO:0051246 regulation of protein metabolic process 1.79% (1/56) 5.99 0.015685 0.042408
GO:1905369 endopeptidase complex 1.79% (1/56) 5.99 0.015685 0.042408
GO:0006289 nucleotide-excision repair 1.79% (1/56) 5.99 0.015685 0.042408
GO:0006357 regulation of transcription by RNA polymerase II 1.79% (1/56) 5.72 0.018793 0.047307
GO:0016592 mediator complex 1.79% (1/56) 5.72 0.018793 0.047307
GO:0042398 cellular modified amino acid biosynthetic process 1.79% (1/56) 5.72 0.018793 0.047307
GO:0016881 acid-amino acid ligase activity 1.79% (1/56) 5.72 0.018793 0.047307
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_55 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_75 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_200 0.165 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_217 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_226 0.049 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_246 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_252 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_254 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_5 0.128 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_33 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_72 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_88 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_117 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_155 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_31 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_67 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_112 0.057 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_131 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_134 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_138 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_167 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_185 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_226 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_228 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_234 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_252 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_253 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_262 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_273 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_300 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_303 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_39 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_75 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_82 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_93 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_108 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_125 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_159 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (56) (download table)

InterPro Domains

GO Terms

Family Terms