Coexpression cluster: Cluster_151 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006488 dolichol-linked oligosaccharide biosynthetic process 1.61% (1/62) 6.58 0.010448 0.044405
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process 1.61% (1/62) 6.58 0.010448 0.044405
GO:0019829 ATPase-coupled cation transmembrane transporter activity 1.61% (1/62) 8.16 0.003495 0.044558
GO:0030686 90S preribosome 1.61% (1/62) 8.16 0.003495 0.044558
GO:0042625 ATPase-coupled ion transmembrane transporter activity 1.61% (1/62) 8.16 0.003495 0.044558
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 1.61% (1/62) 8.16 0.003495 0.044558
GO:0046961 proton-transporting ATPase activity, rotational mechanism 1.61% (1/62) 8.16 0.003495 0.044558
GO:0007029 endoplasmic reticulum organization 1.61% (1/62) 8.16 0.003495 0.044558
GO:0008150 biological_process 29.03% (18/62) 0.86 0.007071 0.045079
GO:0044267 cellular protein metabolic process 12.9% (8/62) 1.41 0.010022 0.045434
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.61% (1/62) 7.16 0.006977 0.045916
GO:0051499 D-aminoacyl-tRNA deacylase activity 1.61% (1/62) 7.16 0.006977 0.045916
GO:0008541 proteasome regulatory particle, lid subcomplex 1.61% (1/62) 7.16 0.006977 0.045916
GO:0043085 positive regulation of catalytic activity 1.61% (1/62) 7.16 0.006977 0.045916
GO:0030490 maturation of SSU-rRNA 1.61% (1/62) 7.16 0.006977 0.045916
GO:0005672 transcription factor TFIIA complex 1.61% (1/62) 7.16 0.006977 0.045916
GO:0044093 positive regulation of molecular function 1.61% (1/62) 7.16 0.006977 0.045916
GO:0030688 preribosome, small subunit precursor 1.61% (1/62) 7.16 0.006977 0.045916
GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity 1.61% (1/62) 7.16 0.006977 0.045916
GO:0005198 structural molecule activity 4.84% (3/62) 2.73 0.010396 0.046104
GO:0043603 cellular amide metabolic process 4.84% (3/62) 2.76 0.009965 0.046202
GO:0006518 peptide metabolic process 4.84% (3/62) 2.78 0.009545 0.046361
GO:0043604 amide biosynthetic process 4.84% (3/62) 2.79 0.009339 0.046466
GO:0071704 organic substance metabolic process 22.58% (14/62) 1.1 0.004336 0.046553
GO:0044260 cellular macromolecule metabolic process 14.52% (9/62) 1.31 0.009845 0.046709
GO:0019538 protein metabolic process 14.52% (9/62) 1.35 0.008259 0.0468
GO:0005840 ribosome 4.84% (3/62) 2.9 0.007602 0.046991
GO:0003735 structural constituent of ribosome 4.84% (3/62) 2.84 0.008541 0.047088
GO:0008152 metabolic process 22.58% (14/62) 0.98 0.009272 0.047289
GO:0034645 cellular macromolecule biosynthetic process 6.45% (4/62) 2.63 0.003987 0.04784
GO:0006807 nitrogen compound metabolic process 19.35% (12/62) 1.09 0.00915 0.047862
GO:0044271 cellular nitrogen compound biosynthetic process 8.06% (5/62) 2.0 0.008222 0.047924
GO:0043043 peptide biosynthetic process 4.84% (3/62) 2.81 0.008934 0.047964
GO:0006405 RNA export from nucleus 1.61% (1/62) 6.16 0.013907 0.048914
GO:0016272 prefoldin complex 1.61% (1/62) 6.16 0.013907 0.048914
GO:0006406 mRNA export from nucleus 1.61% (1/62) 6.16 0.013907 0.048914
GO:0051168 nuclear export 1.61% (1/62) 6.16 0.013907 0.048914
GO:0050657 nucleic acid transport 1.61% (1/62) 6.16 0.013907 0.048914
GO:0050658 RNA transport 1.61% (1/62) 6.16 0.013907 0.048914
GO:0051028 mRNA transport 1.61% (1/62) 6.16 0.013907 0.048914
GO:0051236 establishment of RNA localization 1.61% (1/62) 6.16 0.013907 0.048914
GO:0006412 translation 4.84% (3/62) 2.86 0.008157 0.048943
GO:0044237 cellular metabolic process 20.97% (13/62) 1.16 0.004324 0.049
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_25 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_51 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_131 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_137 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_153 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_226 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_240 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_23 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_55 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_91 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_107 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_5 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_83 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_155 0.039 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_166 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_31 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_109 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_112 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_134 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_138 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_154 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_201 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_246 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_258 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_161 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_168 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_252 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms